miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51266_osa-miRf12051-akr:pmrd
Length = 118
Score = 145 bits (73), Expect = 8e-36
Identities = 94/101 (93%)
Strand = Plus / Minus
Query: 7 tgtaagcggctaacccgcgaaacccacttataggccaaaataagccacaaactcgtttat 66
|||||| ||||||||||||||||||||||||| || |||||||||||| ||| || ||||
Sbjct: 108 tgtaagtggctaacccgcgaaacccacttataagctaaaataagccacgaacccgcttat 49
Query: 67 tttgacctataagtgggttcgcggcttacccacttacaccc 107
|||||||||||||||||||||||||| ||||||||||||||
Sbjct: 48 tttgacctataagtgggttcgcggctgacccacttacaccc 8
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 27 aacccacttataggccaaaataagc 51
|||||||||||||| ||||||||||
Sbjct: 30 aacccacttataggtcaaaataagc 54
>51267_osa-miRf12052-akr:pmrd
Length = 100
Score = 141 bits (71), Expect = 1e-34
Identities = 92/99 (92%)
Strand = Plus / Minus
Query: 7 tgtaagcggctaacccgcgaaacccacttataggccaaaataagccacaaactcgtttat 66
|||||| ||||||||||||||||||||||||| || |||||||||||| ||| || ||||
Sbjct: 99 tgtaagtggctaacccgcgaaacccacttataagctaaaataagccacgaacccgcttat 40
Query: 67 tttgacctataagtgggttcgcggcttacccacttacac 105
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 39 tttgacctataagtgggttcgcggctgacccacttacac 1
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 27 aacccacttataggccaaaataagc 51
|||||||||||||| ||||||||||
Sbjct: 21 aacccacttataggtcaaaataagc 45
>50296_osa-miRf11081-akr:pmrd
Length = 110
Score = 129 bits (65), Expect = 5e-31
Identities = 92/101 (91%)
Strand = Plus / Minus
Query: 7 tgtaagcggctaacccgcgaaacccacttataggccaaaataagccacaaactcgtttat 66
|||||| |||||||||||||||||||||||||||| |||||||||||| ||| | ||||
Sbjct: 104 tgtaagtggctaacccgcgaaacccacttataggctaaaataagccacgaacctgcttat 45
Query: 67 tttgacctataagtgggttcgcggcttacccacttacaccc 107
||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 44 tttgatctataagtgggttcgcggttgacccacttacaccc 4
Score = 44.1 bits (22), Expect = 2e-05
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 63 ttattttgacctataagtgggtt-cgcggcttacccacttacaccc 107
||||||| |||||||||||||| ||||| ||| ||||||||||||
Sbjct: 62 ttattttagcctataagtgggtttcgcgggttagccacttacaccc 107
>50196_osa-miRf10981-akr:pmrd
Length = 110
Score = 129 bits (65), Expect = 5e-31
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 7 tgtaagcggctaacccgcgaaacccacttataggccaaaataagccacaaactcgtttat 66
|||||| |||||||||||||||||||||||||||| |||||||||| | ||| || ||||
Sbjct: 7 tgtaagtggctaacccgcgaaacccacttataggctaaaataagccgcgaacccgcttat 66
Query: 67 tttgacctataagtgggttcgcggcttacccacttacaccc 107
||||||||| || ||||||||||||| ||||||||||||||
Sbjct: 67 tttgacctaaaaatgggttcgcggctgacccacttacaccc 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 63 ttattttgacctataagtgggtt-cgcggcttacccacttacaccc 107
||||||| |||||||||||||| ||||| ||| ||||||||||||
Sbjct: 49 ttattttagcctataagtgggtttcgcgggttagccacttacaccc 4
>50606_osa-miRf11391-akr:pmrd
Length = 110
Score = 123 bits (62), Expect = 3e-29
Identities = 89/98 (90%)
Strand = Plus / Minus
Query: 7 tgtaagcggctaacccgcgaaacccacttataggccaaaataagccacaaactcgtttat 66
|||||| |||||||||||||||||||||||||||| |||||||||| ||| || ||||
Sbjct: 104 tgtaagtggctaacccgcgaaacccacttataggctaaaataagccgtgaacccgcttat 45
Query: 67 tttgacctataagtgggttcgcggcttacccacttaca 104
||||| |||||||||||||||||||| |||||||||||
Sbjct: 44 tttgatctataagtgggttcgcggctgacccacttaca 7
Score = 44.1 bits (22), Expect = 2e-05
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 63 ttattttgacctataagtgggtt-cgcggcttacccacttacaccc 107
||||||| |||||||||||||| ||||| ||| ||||||||||||
Sbjct: 62 ttattttagcctataagtgggtttcgcgggttagccacttacaccc 107
>49603_osa-miRf10388-akr:pmrd
Length = 110
Score = 121 bits (61), Expect = 1e-28
Identities = 91/101 (90%)
Strand = Plus / Plus
Query: 7 tgtaagcggctaacccgcgaaacccacttataggccaaaataagccacaaactcgtttat 66
|||||| ||||||||||||||||| ||||||| || |||||||||| | || || ||||
Sbjct: 7 tgtaagtggctaacccgcgaaacctacttataagctaaaataagccgcggacccgcttat 66
Query: 67 tttgacctataagtgggttcgcggcttacccacttacaccc 107
|||||||||||||||||||||||||| ||||||||||||||
Sbjct: 67 tttgacctataagtgggttcgcggctgacccacttacaccc 107
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 27 aacccacttataggccaaaataagc 51
|||||||||||||| ||||||||||
Sbjct: 85 aacccacttataggtcaaaataagc 61
>49458_osa-miRf10243-akr:pmrd
Length = 116
Score = 111 bits (56), Expect = 1e-25
Identities = 89/100 (89%)
Strand = Plus / Plus
Query: 7 tgtaagcggctaacccgcgaaacccacttataggccaaaataagccacaaactcgtttat 66
|||||| ||||||||||||||||||||||||| || |||||||||| | ||| || ||||
Sbjct: 10 tgtaagtggctaacccgcgaaacccacttataagctaaaataagccgcgaacccgattat 69
Query: 67 tttgacctataagtgggttcgcggcttacccacttacacc 106
|| |||||| ||||||||||| |||| |||||||||||||
Sbjct: 70 ttggacctacaagtgggttcgtggctaacccacttacacc 109
>50776_osa-miRf11561-akr:pmrd
Length = 122
Score = 97.6 bits (49), Expect = 2e-21
Identities = 88/101 (87%)
Strand = Plus / Minus
Query: 7 tgtaagcggctaacccgcgaaacccacttataggccaaaataagccacaaactcgtttat 66
|||||| | ||||||||||||||||||||||| | |||||||||| | | | || ||||
Sbjct: 111 tgtaagtgactaacccgcgaaacccacttataaactaaaataagccgcgagcccgcttat 52
Query: 67 tttgacctataagtgggttcgcggcttacccacttacaccc 107
|||||||||||||||| ||||||| | ||||||||||||||
Sbjct: 51 tttgacctataagtggattcgcggttgacccacttacaccc 11
>50588_osa-miRf11373-akr:pmrd
Length = 112
Score = 97.6 bits (49), Expect = 2e-21
Identities = 88/101 (87%)
Strand = Plus / Plus
Query: 7 tgtaagcggctaacccgcgaaacccacttataggccaaaataagccacaaactcgtttat 66
|||||| |||||||||||||||| |||||||||| |||||||||| ||| || ||||
Sbjct: 8 tgtaagtggctaacccgcgaaacttacttataggctaaaataagccgtgaacccgcttat 67
Query: 67 tttgacctataagtgggttcgcggcttacccacttacaccc 107
||| | ||||||||||||||||||| ||||||||||||||
Sbjct: 68 tttaatatataagtgggttcgcggctcacccacttacaccc 108
>50011_osa-miRf10796-akr:pmrd
Length = 110
Score = 87.7 bits (44), Expect = 2e-18
Identities = 86/100 (86%)
Strand = Plus / Plus
Query: 7 tgtaagcggctaacccgcgaaacccacttataggccaaaataagccacaaactcgtttat 66
|||||| ||||||||||||||||| | |||||| | |||||||||| | | | || ||||
Sbjct: 7 tgtaagtggctaacccgcgaaacctatttatagactaaaataagccgcgagcccgcttat 66
Query: 67 tttgacctataagtgggttcgcggcttacccacttacacc 106
||||| |||||| | ||||||||||| |||||||||||||
Sbjct: 67 tttgatctataaataggttcgcggctgacccacttacacc 106
>50010_osa-miRf10795-akr:pmrd
Length = 110
Score = 87.7 bits (44), Expect = 2e-18
Identities = 86/100 (86%)
Strand = Plus / Minus
Query: 7 tgtaagcggctaacccgcgaaacccacttataggccaaaataagccacaaactcgtttat 66
|||||| ||||||||||||||||| | |||||| | |||||||||| | | | || ||||
Sbjct: 104 tgtaagtggctaacccgcgaaacctatttatagactaaaataagccgcgagcccgcttat 45
Query: 67 tttgacctataagtgggttcgcggcttacccacttacacc 106
||||| |||||| | ||||||||||| |||||||||||||
Sbjct: 44 tttgatctataaataggttcgcggctgacccacttacacc 5
>50746_osa-miRf11531-akr:pmrd
Length = 106
Score = 73.8 bits (37), Expect = 2e-14
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 7 tgtaagcggctaacccgcgaaacccacttataggccaaaataagccacaaactcgtttat 66
|||||| |||||||||||||||||||||||||| |||||||||| | | | | ||||
Sbjct: 5 tgtaagtggctaacccgcgaaacccacttatagattaaaataagccgcgagcccacttat 64
Query: 67 tttgacctataagtgggttcgcggcttacccacttacaccc 107
||||| |||||||| ||||| |||| ||||||||| ||||
Sbjct: 65 tttgatgtataagtgagttcgtggctaacccacttataccc 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 63 ttattttgacctataagtgggtt-cgcggcttacccacttacaccc 107
||||||| | ||||||||||||| ||||| ||| ||||||||||||
Sbjct: 47 ttattttaatctataagtgggtttcgcgggttagccacttacaccc 2
>50893_osa-miRf11678-akr:pmrd
Length = 88
Score = 65.9 bits (33), Expect = 6e-12
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 7 tgtaagcggctaacccgcgaaacccacttataggccaaaataagc 51
|||||| || |||||||||||||||||||||||| ||||||||||
Sbjct: 83 tgtaagtggttaacccgcgaaacccacttataggtcaaaataagc 39
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 76 taagtgggttcgcggcttacccacttacaccc 107
||||||||||||||||| ||||||||||||||
Sbjct: 33 taagtgggttcgcggctgacccacttacaccc 2
Score = 54.0 bits (27), Expect = 2e-08
Identities = 40/43 (93%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 63 ttattttgacctataagtggg-ttcgcggcttacccacttaca 104
||||||||||||||||||||| ||||||| ||| |||||||||
Sbjct: 41 ttattttgacctataagtgggtttcgcgggttaaccacttaca 83
