miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>49071_osa-miR818e:pmrd
          Length = 225

 Score = 69.9 bits (35), Expect = 7e-13
 Identities = 51/55 (92%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                  
Query: 158 aaataagacgagtggtcaaacagtgcaaacaaaatgtcaaaaatcccttatatta 212
           |||||||||||||||||||||||||||| |||||  || ||||||||||||||||
Sbjct: 64  aaataagacgagtggtcaaacagtgcaagcaaaaactc-aaaatcccttatatta 11



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                 
Query: 159 aataagacgagtggtcaaacagtgcaaacaaaatgtcaaaaatcccttatatta 212
           ||||| ||||||||||||||| | |||||||||  |  ||||||||||||||||
Sbjct: 162 aataaaacgagtggtcaaacaatacaaacaaaaact-taaaatcccttatatta 214



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 42/48 (87%), Gaps = 1/48 (2%)
 Strand = Plus / Plus

                                                          
Query: 3  taatataagggattttgacattttacttgctactgtttggccattcgt 50
          ||||||||||||||||||  |||| ||||| |||||||| ||| ||||
Sbjct: 11 taatataagggattttgagtttttgcttgc-actgtttgaccactcgt 57




>49422_osa-miRf10207-akr:pmrd
          Length = 165

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 66/84 (78%)
 Strand = Plus / Minus

                                                                       
Query: 107 caaagtactttaagcacaacttctcnnnnnnnatatttgcacaannnnnnnaaataagac 166
           |||||||||||||||||||||| ||       ||||||||||||        ||||||||
Sbjct: 84  caaagtactttaagcacaacttttcgttttttatatttgcacaatttttttgaataagac 25

                                   
Query: 167 gagtggtcaaacagtgcaaacaaa 190
           ||||| ||||||||||||| ||||
Sbjct: 24  gagtgatcaaacagtgcaagcaaa 1



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 159 aataagacgagtggtcaaacag 180
           ||||||||||||||||||||||
Sbjct: 134 aataagacgagtggtcaaacag 155




>51209_osa-miRf11994-akr:pmrd
          Length = 183

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 159 aataagacgagtggtcaaacagtgcaaacaaaa 191
           ||||||||||||||||||||| ||||| |||||
Sbjct: 144 aataagacgagtggtcaaacattgcaagcaaaa 176