miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 121 bits (61), Expect = 2e-28
Identities = 107/122 (87%), Gaps = 4/122 (3%)
Strand = Plus / Minus
Query: 32 taaactgcgagacgaatttattaagcctaattaacttgtcattagtaaatgtttacggta 91
|||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||
Sbjct: 175 taaactgcgagacgaatttattaagcctaattaatccgtcattagcaaatgtttactgta 116
Query: 92 gcaccacattttttatcaaataatgacgcaattaggcttaaaagattcgtcttgcaattt 151
|||||||| || ||| || ||| ||||||||||||||||||||||||| |||||||
Sbjct: 115 gcaccaca----ttgtcagatcatggagcaattaggcttaaaagattcgtctcgcaattt 60
Query: 152 ac 153
||
Sbjct: 59 ac 58
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 32 taaactgcgagacgaatttattaagcctaatt 63
|||| |||||||||||| | ||||||||||||
Sbjct: 59 taaattgcgagacgaatcttttaagcctaatt 90
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 99.6 bits (50), Expect = 7e-22
Identities = 108/127 (85%), Gaps = 4/127 (3%)
Strand = Plus / Minus
Query: 27 gcctataaactgcgagacgaatttattaagcctaattaacttgtcattagtaaatgttta 86
|||| ||||| |||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 135 gcctgtaaaccgcgagacgaatttattaagcctaattaatccatcattagcaaatgttta 76
Query: 87 cggtagcaccacattttttatcaaataatgacgcaattaggcttaaaagattcgtcttgc 146
| |||||||||||| | ||||| ||| ||||||||||||||||||| ||||| ||
Sbjct: 75 ctttagcaccacattgt----caaattatggtgcaattaggcttaaaagatccgtctcgc 20
Query: 147 aatttac 153
|||||||
Sbjct: 19 aatttac 13
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 60.0 bits (30), Expect = 6e-10
Identities = 82/99 (82%), Gaps = 4/99 (4%)
Strand = Plus / Minus
Query: 45 gaatttattaagcctaattaacttgtcattagtaaatgtttacggtagcaccacattttt 104
|||||||| |||||||||||| |||||||| ||||||||| ||| ||| ||||| ||
Sbjct: 116 gaatttatgaagcctaattaatccgtcattagcaaatgtttattgtaccacaacattgtt 57
Query: 105 tatcaaataatgacgcaattaggcttaaaagattcgtct 143
|||| ||| ||||||||||| ||||||||||||||
Sbjct: 56 ----aaattatggcgcaattaggcctaaaagattcgtct 22
>49015_osa-miR445h:pmrd
Length = 277
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 36 ctgcgagacgaatttattaagcctaattaa 65
||||||||||||||| ||||||||||||||
Sbjct: 93 ctgcgagacgaattttttaagcctaattaa 122
>49014_osa-miR445g:pmrd
Length = 275
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 36 ctgcgagacgaatttattaagcctaattaa 65
||||||||||||||| ||||||||||||||
Sbjct: 92 ctgcgagacgaattttttaagcctaattaa 121
>49012_osa-miR445e:pmrd
Length = 265
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 36 ctgcgagacgaatttattaagcctaattaa 65
||||||||||||||| ||||||||||||||
Sbjct: 87 ctgcgagacgaattttttaagcctaattaa 116
>49010_osa-miR445c:pmrd
Length = 260
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 36 ctgcgagacgaatttattaagcctaattaa 65
||||||||||||||| ||||||||||||||
Sbjct: 85 ctgcgagacgaattttttaagcctaattaa 114
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 121 aattaggcttaaaagattcgtct 143
|||||||||||||||||||||||
Sbjct: 149 aattaggcttaaaagattcgtct 171
>49008_osa-miR445a:pmrd
Length = 268
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 36 ctgcgagacgaatttattaagcctaattaa 65
||||||||||||||| ||||||||||||||
Sbjct: 80 ctgcgagacgaattttttaagcctaattaa 109
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 121 aattaggcttaaaagattcgtcttgcaattt 151
||||||||| |||||||||||||||| ||||
Sbjct: 34 aattaggctcaaaagattcgtcttgcgattt 4
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 121 aattaggcttaaaagattcgtct 143
|||||||||||||||||||||||
Sbjct: 91 aattaggcttaaaagattcgtct 113
>49013_osa-miR445f:pmrd
Length = 305
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 36 ctgcgagacgaatttattaagcctaattaa 65
||||| ||||||||| ||||||||||||||
Sbjct: 108 ctgcgggacgaattttttaagcctaattaa 137
>49009_osa-miR445b:pmrd
Length = 264
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 36 ctgcgagacgaatttattaagcctaattaa 65
|||||||||||| || ||||||||||||||
Sbjct: 86 ctgcgagacgaactttttaagcctaattaa 115
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 121 aattaggcttaaaagattcgtcttg 145
||||||||| |||||||||||||||
Sbjct: 33 aattaggctcaaaagattcgtcttg 9
