miRNEST 2.0, an integrative microRNA resource :: BLAST
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 155 bits (78), Expect = 1e-38
Identities = 118/130 (90%), Gaps = 1/130 (0%)
Strand = Plus / Minus
Query: 2 aatccacctgtaaaccgcgagacgaatttattaagcctaattaatccatcattagtaaat 61
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 140 aatccgcctgtaaaccgcgagacgaatttattaagcctaattaatccatcattagcaaat 81
Query: 62 gtttactatagcaccacattgttaaacctatggcgtaattaggcttaaaagattcgcctc 121
||||||| |||||||||||||| ||| ||||| | ||||||||||||||||| || |||
Sbjct: 80 gtttactttagcaccacattgtcaaa-ttatggtgcaattaggcttaaaagatccgtctc 22
Query: 122 ataatttaca 131
||||||||
Sbjct: 21 gcaatttaca 12
>49004_osa-miR442:pmrd
Length = 233
Score = 133 bits (67), Expect = 4e-32
Identities = 110/123 (89%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 9 ctgtaaaccgcgagacgaatttattaagcctaattaatccatcattagtaaatgtttact 68
|||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 178 ctgtaaactgcgagacgaatttattaagcctaattaatccgtcattagcaaatgtttact 119
Query: 69 atagcaccacattgttaaacctatggcgtaattaggcttaaaagattcgcctcataattt 128
|||||||||||||| | | | |||| | |||||||||||||||||||| ||| |||||
Sbjct: 118 gtagcaccacattgtcagatc-atggagcaattaggcttaaaagattcgtctcgcaattt 60
Query: 129 aca 131
|||
Sbjct: 59 aca 57
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 89.7 bits (45), Expect = 5e-19
Identities = 82/93 (88%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 25 gaatttattaagcctaattaatccatcattagtaaatgtttactatagcaccacattgtt 84
|||||||| ||||||||||||||| ||||||| ||||||||| | || ||| ||||||||
Sbjct: 116 gaatttatgaagcctaattaatccgtcattagcaaatgtttattgtaccacaacattgtt 57
Query: 85 aaacctatggcgtaattaggcttaaaagattcg 117
||| ||||||| |||||||| |||||||||||
Sbjct: 56 aaa-ttatggcgcaattaggcctaaaagattcg 25
>49008_osa-miR445a:pmrd
Length = 268
Score = 87.7 bits (44), Expect = 2e-18
Identities = 87/100 (87%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 18 gcgagacgaatttattaagcctaattaatccatcattagtaaatgtttactatagcacca 77
||||||||||||| ||||||||||||||||||| |||| ||| ||||||| ||||| ||
Sbjct: 82 gcgagacgaattttttaagcctaattaatccataattatgaaaagtttactgtagcatca 141
Query: 78 cattgttaaacctatggcgtaattaggcttaaaagattcg 117
|||||| ||| | |||| |||||||| || ||||||||||
Sbjct: 142 cattgtcaaatc-atggtgtaattagactcaaaagattcg 180
>49015_osa-miR445h:pmrd
Length = 277
Score = 63.9 bits (32), Expect = 3e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 18 gcgagacgaatttattaagcctaattaatccatcattagtaaatgtttacta 69
||||||||||||| ||||||||||||||||||| |||| ||| ||||||||
Sbjct: 95 gcgagacgaattttttaagcctaattaatccataattatgaaaagtttacta 146
>49014_osa-miR445g:pmrd
Length = 275
Score = 63.9 bits (32), Expect = 3e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 18 gcgagacgaatttattaagcctaattaatccatcattagtaaatgtttacta 69
||||||||||||| ||||||||||||||||||| |||| ||| ||||||||
Sbjct: 94 gcgagacgaattttttaagcctaattaatccataattatgaaaagtttacta 145
>49012_osa-miR445e:pmrd
Length = 265
Score = 63.9 bits (32), Expect = 3e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 18 gcgagacgaatttattaagcctaattaatccatcattagtaaatgtttacta 69
||||||||||||| ||||||||||||||||||| |||| ||| ||||||||
Sbjct: 89 gcgagacgaattttttaagcctaattaatccataattatgaaaagtttacta 140
>49010_osa-miR445c:pmrd
Length = 260
Score = 63.9 bits (32), Expect = 3e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 18 gcgagacgaatttattaagcctaattaatccatcattagtaaatgtttacta 69
||||||||||||| ||||||||||||||||||| |||| ||| ||||||||
Sbjct: 87 gcgagacgaattttttaagcctaattaatccataattatgaaaagtttacta 138
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 91 atggcgtaattaggcttaaaagattcg 117
|||| ||||||||||||||||||||||
Sbjct: 142 atggtgtaattaggcttaaaagattcg 168
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 19 cgagacgaatttattaagcctaattaatccatcattagtaaa 60
|||||||||| | ||||||||||||| |||| |||||||||
Sbjct: 173 cgagacgaatcttttaagcctaattacaccatgattagtaaa 132
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 60.0 bits (30), Expect = 5e-10
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 13 aaaccgcgagacgaatttattaagcctaattaatccatcattagta 58
|||||||||||||||| | || ||| ||||||||||||||||||||
Sbjct: 118 aaaccgcgagacgaatcttttgagcataattaatccatcattagta 73
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 56.0 bits (28), Expect = 7e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 13 aaaccgcgagacgaatttattaagcctaattaatccatcattag 56
|||||||||||||||| | || |||||||||||||| |||||||
Sbjct: 3 aaaccgcgagacgaatcttttgagcctaattaatccgtcattag 46
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 97 taattaggcttaaaagattcg 117
|||||||||||||||||||||
Sbjct: 90 taattaggcttaaaagattcg 110
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 17 cgcgagacgaatttattaagcctaatta 44
|||||||||||| | |||||||||||||
Sbjct: 117 cgcgagacgaatcttttaagcctaatta 90
>49013_osa-miR445f:pmrd
Length = 305
Score = 56.0 bits (28), Expect = 7e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 22 gacgaatttattaagcctaattaatccatcattagtaaatgtttacta 69
||||||||| ||||||||||||||||||| |||| ||| ||||||||
Sbjct: 114 gacgaattttttaagcctaattaatccataattatgaaaagtttacta 161
>49009_osa-miR445b:pmrd
Length = 264
Score = 56.0 bits (28), Expect = 7e-09
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 18 gcgagacgaatttattaagcctaattaatccatcattagtaaatgtttacta 69
|||||||||| || ||||||||||||||||||| |||| ||| ||||||||
Sbjct: 88 gcgagacgaactttttaagcctaattaatccataattatgaaaagtttacta 139
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 13 aaaccgcgagacgaatttattaagcctaattaatccatcattagtaaatgt 63
|||||||||||||||| | || ||||||||||| || ||||||||| ||||
Sbjct: 4 aaaccgcgagacgaatcttttgagcctaattaagccgtcattagtacatgt 54
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 8 cctgtaaaccgcgagacgaatttattaagcctaattaatcc 48
|||| |||||||||||||||| | || ||||||||||||||
Sbjct: 127 cctggaaaccgcgagacgaatcttttgagcctaattaatcc 87
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 13 aaaccgcgagacgaatttattaagcctaattaatccatcattag 56
||||||||||| |||| | || |||||||||||||| |||||||
Sbjct: 119 aaaccgcgagatgaatctcttgagcctaattaatccgtcattag 76
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 8 cctgtaaaccgcgagacgaatttattaagcctaattaatccatcatta 55
|||| |||||||||||||||| | || ||||||||||| || ||||||
Sbjct: 2 cctggaaaccgcgagacgaatcttttgagcctaattaagccgtcatta 49
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 17 cgcgagacgaatttattaagcctaattaatccatcatta 55
|||||||| ||| |||| |||||||||||||||| ||||
Sbjct: 10 cgcgagacaaatctattgagcctaattaatccatgatta 48
>49011_osa-miR445d:pmrd
Length = 312
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 32 ttaagcctaattaatccatcattagtaaatgtttactatagcaccacat 80
||||||||||||||||||| |||| | ||||||| | ||||| |||||
Sbjct: 193 ttaagcctaattaatccataattaacacatgtttagtgtagcatcacat 145
>49016_osa-miR445i:pmrd
Length = 244
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 32 ttaagcctaattaatccatcatta 55
||||||||||||||||||| ||||
Sbjct: 110 ttaagcctaattaatccataatta 133
