miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49358_osa-miRf10143-akr:pmrd
Length = 92
Score = 176 bits (89), Expect = 2e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 12 atttttgcatgcgnatgggccggccgcatgcgaaaagggtgatttttacagaccttctcc 71
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttttgcatgcggatgggccggccgcatgcgaaaagggtgatttttacagaccttctcc 60
Query: 72 cacatgcggttgccccaaccgcatgcaaagat 103
||||||||||||||||||||||||||||||||
Sbjct: 61 cacatgcggttgccccaaccgcatgcaaagat 92
>49725_osa-miRf10510-akr:pmrd
Length = 98
Score = 155 bits (78), Expect = 8e-39
Identities = 92/97 (94%)
Strand = Plus / Plus
Query: 9 gggatttttgcatgcgnatgggccggccgcatgcgaaaagggtgatttttacagaccttc 68
|||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggattttcgcatgcggttgggccggccgcatgcgaaaagggtgatttttacagaccttc 60
Query: 69 tcccacatgcggttgccccaaccgcatgcaaagatgc 105
|| | ||||||||||||||||||||||||||||||||
Sbjct: 61 tctcccatgcggttgccccaaccgcatgcaaagatgc 97
>49909_osa-miRf10694-akr:pmrd
Length = 101
Score = 91.7 bits (46), Expect = 1e-19
Identities = 81/93 (87%)
Strand = Plus / Minus
Query: 11 gatttttgcatgcgnatgggccggccgcatgcgaaaagggtgatttttacagaccttctc 70
|||||||||||||| || |||||||||||||||||| |||||||| |||||||||||
Sbjct: 97 gatttttgcatgcggttgcaccggccgcatgcgaaaagcgtgattttcgcagaccttctc 38
Query: 71 ccacatgcggttgccccaaccgcatgcaaagat 103
| |||||||||| | |||| ||||||||||||
Sbjct: 37 gcccatgcggttggcgcaactgcatgcaaagat 5
