miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51247_osa-miRf12032-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 3e-14
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 ggagcttctagctgctgcagcttctccgagaatcagaaactcccccaaacagt 66
|||||||||| |||||||||||||||| |||||||||| |||||| |||||||
Sbjct: 60 ggagcttctaactgctgcagcttctcccagaatcagaagctcccctaaacagt 8
>51246_osa-miRf12031-akr:pmrd
Length = 82
Score = 73.8 bits (37), Expect = 3e-14
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 ggagcttctagctgctgcagcttctccgagaatcagaaactcccccaaacagt 66
|||||||||| |||||||||||||||| |||||||||| |||||| |||||||
Sbjct: 62 ggagcttctaactgctgcagcttctcccagaatcagaagctcccctaaacagt 10
>49592_osa-miRf10377-akr:pmrd
Length = 87
Score = 61.9 bits (31), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 5 cctgtttgtggagcttctagctgctgcagcttctccgagaatc 47
|||||||| |||||||||||| |||||||||||||| ||||||
Sbjct: 7 cctgtttggggagcttctagcagctgcagcttctcctagaatc 49
>50239_osa-miRf11024-akr:pmrd
Length = 181
Score = 60.0 bits (30), Expect = 4e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 14 ggagcttctagctgctgcagcttctccgagaatcagaaactcccccaaac 63
|||||||||| ||||| |||||||| | |||||||||| |||||||||||
Sbjct: 132 ggagcttctaactgctacagcttcttctagaatcagaagctcccccaaac 181
>49731_osa-miRf10516-akr:pmrd
Length = 78
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 9 tttgtggagcttctagctgctgcagcttctccgagaatc 47
|||| |||||||||||| |||||||||||||| ||||||
Sbjct: 70 tttggggagcttctagcagctgcagcttctcctagaatc 32
>49730_osa-miRf10515-akr:pmrd
Length = 78
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 9 tttgtggagcttctagctgctgcagcttctccgagaatc 47
|||| |||||||||||| |||||||||||||| ||||||
Sbjct: 70 tttggggagcttctagcagctgcagcttctcctagaatc 32
>49614_osa-miRf10399-akr:pmrd
Length = 79
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 14 ggagcttctagctgctgcagcttctccgagaatc 47
|||||||||||| |||||||||||||| ||||||
Sbjct: 66 ggagcttctagcagctgcagcttctcctagaatc 33
>50404_osa-miRf11189-akr:pmrd
Length = 77
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 6 ctgtttgtggagcttctagctgctgcagcttct 38
||||||| |||||||||||| ||||||||||||
Sbjct: 5 ctgtttggggagcttctagcagctgcagcttct 37
>50403_osa-miRf11188-akr:pmrd
Length = 77
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 6 ctgtttgtggagcttctagctgctgcagcttct 38
||||||| |||||||||||| ||||||||||||
Sbjct: 73 ctgtttggggagcttctagcagctgcagcttct 41
>50321_osa-miRf11106-akr:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 14 ggagcttctagctgctgcagcttctccgagaatc 47
|||||||| |||||||||||||| ||| ||||||
Sbjct: 65 ggagcttccagctgctgcagcttttcccagaatc 98
>50317_osa-miRf11102-akr:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 14 ggagcttctagctgctgcagcttctccgagaatc 47
|||||||| |||||||||||||| ||| ||||||
Sbjct: 65 ggagcttccagctgctgcagcttttcccagaatc 98
>50313_osa-miRf11098-akr:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 14 ggagcttctagctgctgcagcttctccgagaatc 47
|||||||| |||||||||||||| ||| ||||||
Sbjct: 65 ggagcttccagctgctgcagcttttcccagaatc 98
>50064_osa-miRf10849-akr:pmrd
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 14 ggagcttctagctgctgcagcttctccgagaatcagaaactcccccaaacagttcagc 71
||||||||||||| || | |||||| | |||||||| |||||||||||||| ||||
Sbjct: 58 ggagcttctagctatagccgtttctcccaaaatcagaagctcccccaaacagtccagc 1
>50055_osa-miRf10840-akr:pmrd
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 14 ggagcttctagctgctgcagcttctccgagaatc 47
|||||||||||| ||||||||||||| ||||||
Sbjct: 64 ggagcttctagcaactgcagcttctcctagaatc 31
>51253_osa-miRf12038-akr:pmrd
Length = 71
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 14 ggagcttctagctgctgcagcttct 38
|||||||||||| ||||||||||||
Sbjct: 62 ggagcttctagcagctgcagcttct 38
>51252_osa-miRf12037-akr:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 14 ggagcttctagctgctgcagcttct 38
|||||||||||| ||||||||||||
Sbjct: 66 ggagcttctagcagctgcagcttct 42
>49382_osa-miRf10167-akr:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 14 ggagcttctagctgctgcagcttctccgagaat 46
|||||||||||| |||||||||| ||| |||||
Sbjct: 68 ggagcttctagcagctgcagcttatccaagaat 36
>49381_osa-miRf10166-akr:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 14 ggagcttctagctgctgcagcttctccgagaat 46
|||||||||||| |||||||||| ||| |||||
Sbjct: 68 ggagcttctagcagctgcagcttatccaagaat 36
>49380_osa-miRf10165-akr:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 14 ggagcttctagctgctgcagcttctccgagaat 46
|||||||||||| |||||||||| ||| |||||
Sbjct: 16 ggagcttctagcagctgcagcttatccaagaat 48
