miRNEST 2.0, an integrative microRNA resource :: BLAST
>48799_oru-miR806:pmrd
Length = 242
Score = 218 bits (110), Expect = 1e-57
Identities = 199/231 (86%)
Strand = Plus / Plus
Query: 1 tactccctttatcccgaaatgtttgacgccgttgacttttgtaaaaatatttgactgttc 60
|||||||| ||||| |||| ||||||||||||||||||| |||| ||||||||| ||||
Sbjct: 2 tactccctccatcccaaaatatttgacgccgttgacttttttaaatatatttgaccgttc 61
Query: 61 gtcttatttnnnnnnntttaaataataattaattcttttcctatcatttgatttattgtt 120
|||||||| ||||| |||| | |||||| ||||||||||||||||||||||||
Sbjct: 62 gtcttattcaaaaaaatttaagtaattaataattcctttcctatcatttgatttattgtt 121
Query: 121 aaatatacttttatatatgcatatagttttacatatttcacaaaagtttttgaataagac 180
|||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 122 aaatatacttttatatatacatatagttttatatatttcacaaaaatttttgaataagac 181
Query: 181 aaatggttaaacatactttaaaaagtcaacagcgtcaaacatttagggaag 231
|| ||| |||||| || |||| ||||| |||||||| |||||||||||
Sbjct: 182 gaacggtcaaacatgtttaaaaatatcaacggcgtcaaatatttagggaag 232
Score = 54.0 bits (27), Expect = 5e-08
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 167 tttttgaataagacaaatggttaaacatactttaaaaagtcaacagcgtcaaacatttag 226
|||||||||||||| || ||| ||| ||| || ||||||||||| |||||||| |||| |
Sbjct: 75 tttttgaataagacgaacggtcaaatatatttaaaaaagtcaacggcgtcaaatattttg 16
Query: 227 gga 229
|||
Sbjct: 15 gga 13
Score = 50.1 bits (25), Expect = 8e-07
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 12 tcccgaaatgtttgacgccgttgacttttgtaaaaatatttgactgttcgtcttatt 68
|||| |||| |||||||||||||| ||| |||| || |||||| ||||||||||||
Sbjct: 230 tccctaaatatttgacgccgttgatatttttaaacatgtttgaccgttcgtcttatt 174
>49031_osa-miR806h:pmrd
Length = 271
Score = 172 bits (87), Expect = 8e-44
Identities = 180/212 (84%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 15 cgaaatgtttgacgccgttgacttttgtaaaaatatttgactgttcgtcttatttnnnnn 74
|||||||||| ||||||||||||||| | || |||||| ||||||||||||
Sbjct: 28 cgaaatgtttaacgccgttgactttttatcatatgtttgaccgttcgtcttatt-caaaa 86
Query: 75 nntttaaataataattaattcttttcctatcatttgatttattgttaaatatacttttat 134
||||| |||| |||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 87 aatttaagtaattattaattcttttcctatcatttgattcattgttaaatatatttttat 146
Query: 135 atatgcatatagttttacatatttcacaaaagtttttgaataagacaaatggttaaacat 194
|| ||||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||
Sbjct: 147 gtaggcatataattttacatatctcacaaaagtttttgaataagacgaatggtcaaacat 206
Query: 195 actttaaaaagtcaacagcgtcaaacatttag 226
|||||||||||| | |||||||||||||
Sbjct: 207 gtgctaaaaagtcaacggtgtcaaacatttag 238
Score = 52.0 bits (26), Expect = 2e-07
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 167 tttttgaataagacaaatggttaaacatactttaaaaagtcaacagcgtcaaacattt 224
|||||||||||||| || ||| ||||||| |||||||||||| |||| ||||||||
Sbjct: 87 tttttgaataagacgaacggtcaaacatatgataaaaagtcaacggcgttaaacattt 30
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 17 aaatgtttgacgccgttgactttt 40
||||||||||| ||||||||||||
Sbjct: 236 aaatgtttgacaccgttgactttt 213
>49028_osa-miR806e:pmrd
Length = 255
Score = 149 bits (75), Expect = 1e-36
Identities = 174/208 (83%), Gaps = 1/208 (0%)
Strand = Plus / Plus
Query: 17 aaatgtttgacgccgttgacttttgtaaaaatatttgactgttcgtcttatttnnnnnnn 76
|||||||||||||||||||||||| | || |||||| ||||||||||||
Sbjct: 25 aaatgtttgacgccgttgactttttagcatatgtttgaccgttcgtcttatt-caaaaaa 83
Query: 77 tttaaataataattaattcttttcctatcatttgatttattgttaaatatacttttatat 136
||||| |||| ||||||||||||| |||||||| ||||||||||||||||| |||||| |
Sbjct: 84 tttaagtaattattaattcttttcttatcatttaatttattgttaaatatatttttatgt 143
Query: 137 atgcatatagttttacatatttcacaaaagtttttgaataagacaaatggttaaacatac 196
| ||||||| ||||||||||||||||||||||||| |||||||| || ||| ||||||
Sbjct: 144 aggcatataattttacatatttcacaaaagtttttaaataagacgaacggtcaaacatgt 203
Query: 197 tttaaaaagtcaacagcgtcaaacattt 224
|||||||||||| | |||||| ||||
Sbjct: 204 gctaaaaagtcaacggtgtcaaatattt 231
Score = 60.0 bits (30), Expect = 8e-10
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 167 tttttgaataagacaaatggttaaacatactttaaaaagtcaacagcgtcaaacattt 224
|||||||||||||| || ||| ||||||| |||||||||||| |||||||||||||
Sbjct: 82 tttttgaataagacgaacggtcaaacatatgctaaaaagtcaacggcgtcaaacattt 25
>49026_osa-miR806c:pmrd
Length = 270
Score = 135 bits (68), Expect = 2e-32
Identities = 128/148 (86%)
Strand = Plus / Plus
Query: 77 tttaaataataattaattcttttcctatcatttgatttattgttaaatatacttttatat 136
||||| |||| ||| ||| ||||| |||| ||||||||||||||||||||||||| || |
Sbjct: 93 tttaagtaattatttatttttttcatatcgtttgatttattgttaaatatactttcatgt 152
Query: 137 atgcatatagttttacatatttcacaaaagtttttgaataagacaaatggttaaacatac 196
| ||||||||||||||||||||| |||| |||||||||||||| |||||| ||||||
Sbjct: 153 acacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatgt 212
Query: 197 tttaaaaagtcaacagcgtcaaacattt 224
|||||||||||| | |||||||||||
Sbjct: 213 gctaaaaagtcaacggtgtcaaacattt 240
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 cgaaatgtttgacgccgttgactttt 40
||||||||||||| ||||||||||||
Sbjct: 242 cgaaatgtttgacaccgttgactttt 217
>49027_osa-miR806d:pmrd
Length = 271
Score = 127 bits (64), Expect = 4e-30
Identities = 127/148 (85%)
Strand = Plus / Plus
Query: 77 tttaaataataattaattcttttcctatcatttgatttattgttaaatatacttttatat 136
|||||||||| ||| ||||||||| |||||||||||| ||||||||||||||||| ||||
Sbjct: 91 tttaaataattatttattcttttcatatcatttgattcattgttaaatatactttcatat 150
Query: 137 atgcatatagttttacatatttcacaaaagtttttgaataagacaaatggttaaacatac 196
|||||||||||||||||||||||| |||| ||||||||| || ||| ||||||
Sbjct: 151 gcacatatagttttacatatttcacaatttttttagaataagactaacggtcaaacatgt 210
Query: 197 tttaaaaagtcaacagcgtcaaacattt 224
|||||||||||| | |||||||||||
Sbjct: 211 gctaaaaagtcaacggtgtcaaacattt 238
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 17 aaatgtttgacgccgttgactttt 40
||||||||||| ||||||||||||
Sbjct: 238 aaatgtttgacaccgttgactttt 215
>49029_osa-miR806f:pmrd
Length = 241
Score = 125 bits (63), Expect = 2e-29
Identities = 84/91 (92%)
Strand = Plus / Plus
Query: 90 taattcttttcctatcatttgatttattgttaaatatacttttatatatgcatatagttt 149
|||||||||||||||||||||||| ||||||||||||| ||| || || ||||||| |||
Sbjct: 90 taattcttttcctatcatttgattcattgttaaatatattttcatgtaggcatataattt 149
Query: 150 tacatatttcacaaaagtttttgaataagac 180
||||||||||| |||||||||||||||||||
Sbjct: 150 tacatatttcataaaagtttttgaataagac 180
Score = 54.0 bits (27), Expect = 5e-08
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 161 caaaagtttttgaataagacaaatggttaaacatactttaaaaagtcaacagcgtcaaac 220
||||| |||||||||||||| || ||| |||||| |||||||||||| |||||||||
Sbjct: 81 caaaattttttgaataagacgaacggtcaaacatgtaataaaaagtcaacggcgtcaaac 22
Query: 221 att 223
|||
Sbjct: 21 att 19
Score = 44.1 bits (22), Expect = 5e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 15 cgaaatgtttgacgccgttgacttttgtaaaaatatttgactgttcgtcttatt 68
|||||| |||||| |||||||||||| | || |||||||||||||||||||
Sbjct: 226 cgaaatatttgacaccgttgactttttagcacatgtttgactgttcgtcttatt 173
>49030_osa-miR806g:pmrd
Length = 240
Score = 109 bits (55), Expect = 1e-24
Identities = 124/147 (84%)
Strand = Plus / Plus
Query: 78 ttaaataataattaattcttttcctatcatttgatttattgttaaatatacttttatata 137
|||| |||| ||| |||||||| |||||||||||| ||||||||||||||||| || ||
Sbjct: 78 ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
Query: 138 tgcatatagttttacatatttcacaaaagtttttgaataagacaaatggttaaacatact 197
||| |||||||||||||||||| || |||||||||||||| || ||| ||||||
Sbjct: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
Query: 198 ttaaaaagtcaacagcgtcaaacattt 224
|||||||||||| | |||||||||||
Sbjct: 198 ctaaaaagtcaacggtgtcaaacattt 224
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 17 aaatgtttgacgccgttgactttt 40
||||||||||| ||||||||||||
Sbjct: 224 aaatgtttgacaccgttgactttt 201
>49025_osa-miR806b:pmrd
Length = 215
Score = 95.6 bits (48), Expect = 1e-20
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 77 tttaaataataattaattcttttcctatcatttgatttattgttaaatatacttttatat 136
||||| |||| ||| |||||||| |||||||||||| ||||||||||||||||| || |
Sbjct: 65 tttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgt 124
Query: 137 atgcatatagttttacatatttcacaaaagtttttgaataagac 180
| |||||| |||||||||||||||||| ||||| ||||||||
Sbjct: 125 acacatataattttacatatttcacaaattttttttaataagac 168
Score = 42.1 bits (21), Expect = 2e-04
Identities = 52/60 (86%), Gaps = 3/60 (5%)
Strand = Plus / Minus
Query: 167 tttttgaataagacaaatggttaaaca--tactttaaaaagtcaacagcgtcaaacattt 224
|||||||||||||| ||| || ||||| ||||| ||||||||||| | |||||||||||
Sbjct: 62 tttttgaataagacgaatagtcaaacacgtactt-aaaaagtcaacggtgtcaaacattt 4
>49024_osa-miR806a:pmrd
Length = 252
Score = 87.7 bits (44), Expect = 4e-18
Identities = 124/148 (83%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 77 tttaaataataattaattcttttcctatcatttgatttattgttaaatatacttttatat 136
||||| |||| ||| ||||||||| || ||||||||| ||||||||||||||||| || |
Sbjct: 85 tttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatgt 143
Query: 137 atgcatatagttttacatatttcacaaaagtttttgaataagacaaatggttaaacatac 196
| ||||||||||||| ||||||| |||| ||| |||||||| || ||||||||||
Sbjct: 144 acacatatagttttacgtatttcaaaaaaaaattt-aataagacgaacggttaaacatgt 202
Query: 197 tttaaaaagtcaacagcgtcaaacattt 224
|||||||||||| | |||||||||||
Sbjct: 203 gctaaaaagtcaacggtgtcaaacattt 230
Score = 50.1 bits (25), Expect = 8e-07
Identities = 53/60 (88%), Gaps = 3/60 (5%)
Strand = Plus / Minus
Query: 167 tttttgaataagacaaatggttaaaca--tactttaaaaagtcaacagcgtcaaacattt 224
|||||||||||||| |||||| ||||| || |||||||||||||| | |||||||||||
Sbjct: 83 tttttgaataagacgaatggtcaaacacgta-tttaaaaagtcaacggtgtcaaacattt 25
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 17 aaatgtttgacgccgttgactttt 40
||||||||||| ||||||||||||
Sbjct: 230 aaatgtttgacaccgttgactttt 207
>48794_oni-miR812:pmrd
Length = 172
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 163 aaagtttttgaataagacaaatggttaaacat 194
|||||||||||||||||| |||||| ||||||
Sbjct: 128 aaagtttttgaataagacgaatggtcaaacat 159
>51209_osa-miRf11994-akr:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 162 aaaagtttttgaataagacaaatggttaaac 192
||||||||||||||||||||| |||| ||||
Sbjct: 51 aaaagtttttgaataagacaagtggtcaaac 21
>49189_osa-miR1884a:pmrd
Length = 214
Score = 44.1 bits (22), Expect = 5e-05
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 167 tttttgaataagacaaatggttaaacatactttaaaaagtcaacagcgtcaaacattt 224
|||||||||||||| |||||| |||| | | | |||||||||| |||||| ||||||
Sbjct: 61 tttttgaataagacgaatggtcaaacgttgtatgaaaagtcaacggcgtcacacattt 4
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 17 aaatgtttgacgccgttgactttt 40
|||||| |||||||||||||||||
Sbjct: 4 aaatgtgtgacgccgttgactttt 27
>49190_osa-miR1884b:pmrd
Length = 221
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 201 aaaagtcaacagcgtcaaacattta 225
||||||||||||||||| |||||||
Sbjct: 33 aaaagtcaacagcgtcatacattta 9
