miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48432_cre-miR907:pmrd
Length = 183
Score = 357 bits (180), Expect = 2e-99
Identities = 183/183 (100%)
Strand = Plus / Plus
Query: 1 ccagcccagcgctcgcaccgctcgcagaagacatcgctggcaccgtgttggccgccattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccagcccagcgctcgcaccgctcgcagaagacatcgctggcaccgtgttggccgccattt 60
Query: 61 gagcgcttggtcacatcgctggcacccacggctggcaccgtggccgccacttgaccaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagcgcttggtcacatcgctggcacccacggctggcaccgtggccgccacttgaccaagc 120
Query: 121 gctaaatatcggccaacncggtgccagcgatgtcttctgcgagcggtgcgagcgctgggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctaaatatcggccaacncggtgccagcgatgtcttctgcgagcggtgcgagcgctgggc 180
Query: 181 tgg 183
|||
Sbjct: 181 tgg 183
Score = 129 bits (65), Expect = 8e-31
Identities = 162/189 (85%), Gaps = 12/189 (6%)
Strand = Plus / Minus
Query: 1 ccagcccagcgctcgcaccgctcgcagaagacatcgctggcaccgtgttggccgccattt 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 183 ccagcccagcgctcgcaccgctcgcagaagacatcgctggcaccgngttggccgatattt 124
Query: 61 gagcgcttggtcacatcgctggcacccacggctggca-ccgtgg----ccgccacttgac 115
|||||||||||| |||| |||||| || || |||||| | || | ||||
Sbjct: 123 -agcgcttggtca----agtggcggccacgg-tgccagccgtgggtgccagcgatgtgac 70
Query: 116 caagcgct-aaatatcggccaacncggtgccagcgatgtcttctgcgagcggtgcgagcg 174
|||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 69 caagcgctcaaatggcggccaacacggtgccagcgatgtcttctgcgagcggtgcgagcg 10
Query: 175 ctgggctgg 183
|||||||||
Sbjct: 9 ctgggctgg 1
