miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48442_cre-miR918:pmrd
Length = 269
Score = 525 bits (265), Expect = e-150
Identities = 265/265 (100%)
Strand = Plus / Minus
Query: 1 aatgcgggacgtctgcgccgcacatgtctcaggaggacatcgccactattagcaagctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aatgcgggacgtctgcgccgcacatgtctcaggaggacatcgccactattagcaagctac 208
Query: 61 ttcagggtatctcggtcagcatttcgtttggcaagatgtccgcttcaggtacacgccgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ttcagggtatctcggtcagcatttcgtttggcaagatgtccgcttcaggtacacgccgct 148
Query: 121 cacgcgatgaaggcgtcatcgcatgagcggcgcgtacccggagtggacgtcttgccaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cacgcgatgaaggcgtcatcgcatgagcggcgcgtacccggagtggacgtcttgccaatc 88
Query: 181 gagatgctgaccgagataccctccagcagcttgctactacggacgatctcttcctgagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 gagatgctgaccgagataccctccagcagcttgctactacggacgatctcttcctgagac 28
Query: 241 atgtgcggtgcagacgtctcgtatt 265
|||||||||||||||||||||||||
Sbjct: 27 atgtgcggtgcagacgtctcgtatt 3
Score = 188 bits (95), Expect = 1e-48
Identities = 212/251 (84%)
Strand = Plus / Plus
Query: 8 gacgtctgcgccgcacatgtctcaggaggacatcgccactattagcaagctacttcaggg 67
||||||||| ||||||||||||||||| || |||| | || ||||||||| || ||||
Sbjct: 10 gacgtctgcaccgcacatgtctcaggaagagatcgtccgtagtagcaagctgctggaggg 69
Query: 68 tatctcggtcagcatttcgtttggcaagatgtccgcttcaggtacacgccgctcacgcga 127
||||||||||||||| ||| ||||||||| |||| || | ||||| ||||||||| ||||
Sbjct: 70 tatctcggtcagcatctcgattggcaagacgtccactccgggtacgcgccgctcatgcga 129
Query: 128 tgaaggcgtcatcgcatgagcggcgcgtacccggagtggacgtcttgccaatcgagatgc 187
||| | | ||||||| ||||||||| ||||| | || |||| ||||||||| ||| ||||
Sbjct: 130 tgacgccttcatcgcgtgagcggcgtgtacctgaagcggacatcttgccaaacgaaatgc 189
Query: 188 tgaccgagataccctccagcagcttgctactacggacgatctcttcctgagacatgtgcg 247
||||||||||||||| || ||||||||| || | |||| || ||||||||||||||||
Sbjct: 190 tgaccgagataccctgaagtagcttgctaatagtggcgatgtcctcctgagacatgtgcg 249
Query: 248 gtgcagacgtc 258
| |||||||||
Sbjct: 250 gcgcagacgtc 260
