miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>50382_osa-miRf11167-akr:pmrd
Length = 105
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 37 cgagctcgagccgaacttgcctaaaagctcgaaggtgcaat 77
||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 88 cgagctcgaaccgagcttgcctaaaagctcgaaggtgcaat 48
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 85 ggctcgagcttgtgtcgagctcgagctt 112
|||||||||| ||||||||||| |||||
Sbjct: 30 ggctcgagctcgtgtcgagctcaagctt 3
>50973_osa-miRf11758-akr:pmrd
Length = 112
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 37 cgagctcgagccgaacttgcctaaaagctcgaaggtgcaat 77
||||||||| |||| ||||||||||||||| ||||||||||
Sbjct: 21 cgagctcgaaccgagcttgcctaaaagctcaaaggtgcaat 61
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 85 ggctcgagcttgtgtcgagctcgagctt 112
||||||||||||||||||||||||||||
Sbjct: 79 ggctcgagcttgtgtcgagctcgagctt 106
>50289_osa-miRf11074-akr:pmrd
Length = 108
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 37 cgagctcgagccgaacttgcctaaaagctcgaaggtgcaat 77
||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 19 cgagctcgaatcgagcttgcctaaaagctcgaaggtgcaat 59
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 85 ggctcgagcttgtgtcgagctcgagctt 112
||||||||||||||||||| ||||||||
Sbjct: 77 ggctcgagcttgtgtcgagttcgagctt 104
>51237_osa-miRf12022-akr:pmrd
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 85 ggctcgagcttgtgtcgagctcgagc 110
||||||||||||| ||||||||||||
Sbjct: 71 ggctcgagcttgtatcgagctcgagc 96
>50856_osa-miRf11641-akr:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 85 ggctcgagcttgtgtcgagctcgagc 110
||||||||||||| ||||||||||||
Sbjct: 66 ggctcgagcttgtatcgagctcgagc 91
