miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49606_osa-miRf10391-akr:pmrd
Length = 94
Score = 69.9 bits (35), Expect = 4e-13
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 14 cgacataagcacccacacgcgaaaatcaga-ttttcgcttgcgggtgcgccacccgcatg 72
|||| ||| ||||| ||||||||||||| | ||||||| ||||| |||||||||||||||
Sbjct: 73 cgacgtaatcacccgcacgcgaaaatcaaaattttcgcgtgcggttgcgccacccgcatg 14
Query: 73 caaaaat 79
|||||||
Sbjct: 13 caaaaat 7
>50604_osa-miRf11389-akr:pmrd
Length = 139
Score = 63.9 bits (32), Expect = 3e-11
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 20 aagcacccacacgcgaaaatcagattttcgcttgcgggtgcgccacccgcatgcaaaaat 79
|||||||| |||||||||||| ||||||||| ||||| |||||| |||||| ||| ||||
Sbjct: 139 aagcacccgcacgcgaaaatccgattttcgcgtgcggttgcgccgcccgcacgcacaaat 80
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 29 cacgcgaaaatcagattttcgcttgcgggtgc 60
|||||||||||| ||||||||| |||||||||
Sbjct: 106 cacgcgaaaatcggattttcgcgtgcgggtgc 137
