miRNEST 2.0, an integrative microRNA resource :: BLAST
>48799_oru-miR806:pmrd
Length = 242
Score = 170 bits (86), Expect = 4e-43
Identities = 202/242 (83%), Gaps = 14/242 (5%)
Strand = Plus / Minus
Query: 26 cctcctttcctaaatgtttgacgccgtgaacttttttaaacatgtttgactgttcgtttt 85
||||||| ||||||| ||||||||||| | |||||||||||||||||| |||||| ||
Sbjct: 236 cctccttccctaaatatttgacgccgttgatatttttaaacatgtttgaccgttcgtctt 177
Query: 86 attcaaaaatttttgtgaaatatgtaaaactatatgcatacattatatgtatacattaaa 145
||||||||||||||||||||||| |||||||||||| |||| || |||
Sbjct: 176 attcaaaaatttttgtgaaatatataaaactatatg-------------tatatataaaa 130
Query: 146 gtatatttaacaattaatcaaattgtaggaaaataattaataattacttaaa-ctttttg 204
|||||||||||||| |||||||| ||||||| ||||| |||||||||||| ||||||
Sbjct: 129 gtatatttaacaataaatcaaatgataggaaaggaattattaattacttaaatttttttg 70
Query: 205 aataagatgaatggtcaaacatgtttaaaatggtcaatggcgtcaaatatttggggatgg 264
||||||| ||| ||||||| || ||||||| ||||| |||||||||||||| |||||||
Sbjct: 69 aataagacgaacggtcaaatatatttaaaaaagtcaacggcgtcaaatattttgggatgg 10
Query: 265 ag 266
||
Sbjct: 9 ag 8
Score = 71.9 bits (36), Expect = 3e-13
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 199 tttttgaataagatgaatggtcaaacatgtttaaaatggtcaatggcgtcaaatatttgg 258
||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||| |
Sbjct: 168 tttttgaataagacgaacggtcaaacatgtttaaaaatatcaacggcgtcaaatatttag 227
Query: 259 ggatggag 266
||| ||||
Sbjct: 228 ggaaggag 235
Score = 61.9 bits (31), Expect = 3e-10
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 20 atacaccctcctttcctaaatgtttgacgccgtgaacttttttaaacatgtttgactgtt 79
|||| |||||| | || |||| ||||||||||| ||||||||||| || |||||| |||
Sbjct: 1 atactccctccatcccaaaatatttgacgccgttgacttttttaaatatatttgaccgtt 60
Query: 80 cgttttattcaaaaa 94
||| |||||||||||
Sbjct: 61 cgtcttattcaaaaa 75
>49031_osa-miR806h:pmrd
Length = 271
Score = 123 bits (62), Expect = 8e-29
Identities = 165/202 (81%), Gaps = 13/202 (6%)
Strand = Plus / Minus
Query: 25 ccctcctttcctaaatgtttgacgccgtgaacttttttaaacatgtttgactgttcgttt 84
|||||| || ||||||||||||| |||| ||||||| ||||||||||| ||||| |
Sbjct: 248 ccctccgtttctaaatgtttgacaccgttgactttttagcacatgtttgaccattcgtct 189
Query: 85 tattcaaaaatttttgtgaaatatgtaaaactatatgcatacattatatgtatacattaa 144
|||||||||| |||||||| |||||||||| ||||||| ||||| | |
Sbjct: 188 tattcaaaaacttttgtgagatatgtaaaattatatgcctacataa-------------a 142
Query: 145 agtatatttaacaattaatcaaattgtaggaaaataattaataattacttaaactttttg 204
| ||||||||||||| |||||||| |||||||| |||||||||||||||||| ||||||
Sbjct: 141 aatatatttaacaatgaatcaaatgataggaaaagaattaataattacttaaattttttg 82
Query: 205 aataagatgaatggtcaaacat 226
||||||| ||| ||||||||||
Sbjct: 81 aataagacgaacggtcaaacat 60
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 199 tttttgaataagatgaatggtcaaacatgt 228
||||||||||||| ||||||||||||||||
Sbjct: 179 tttttgaataagacgaatggtcaaacatgt 208
Score = 44.1 bits (22), Expect = 6e-05
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 37 aaatgtttgacgccgtgaacttttttaaacatgtttgactgttcgttttattcaaaaa 94
|||||||| ||||||| ||||||| | ||||||||| |||||| |||||||||||
Sbjct: 30 aaatgtttaacgccgttgactttttatcatatgtttgaccgttcgtcttattcaaaaa 87
>49024_osa-miR806a:pmrd
Length = 252
Score = 113 bits (57), Expect = 8e-26
Identities = 88/97 (90%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 129 tatatgtatacattaaagtatatttaacaattaatcaaattgtaggaaaataattaataa 188
||||||| ||||| ||||||||||||||||| |||||||| ||| ||||| ||| |||||
Sbjct: 152 tatatgtgtacatgaaagtatatttaacaatgaatcaaat-gtatgaaaagaataaataa 94
Query: 189 ttacttaaactttttgaataagatgaatggtcaaaca 225
||||||||| ||||||||||||| |||||||||||||
Sbjct: 93 ttacttaaattttttgaataagacgaatggtcaaaca 57
>49026_osa-miR806c:pmrd
Length = 270
Score = 101 bits (51), Expect = 3e-22
Identities = 151/187 (80%), Gaps = 13/187 (6%)
Strand = Plus / Minus
Query: 37 aaatgtttgacgccgtgaacttttttaaacatgtttgactgttcgttttattcaaaaatt 96
||||||||||| |||| ||||||| ||||||||||| ||||| ||||||||||| |
Sbjct: 240 aaatgtttgacaccgttgactttttagcacatgtttgaccattcgtcttattcaaaaaat 181
Query: 97 tttgtgaaatatgtaaaactatatgcatacattatatgtatacattaaagtatatttaac 156
||| ||||||||||||||||||||| | ||||| ||||||||||||||
Sbjct: 180 tttatgaaatatgtaaaactatatg-------------tgtacatgaaagtatatttaac 134
Query: 157 aattaatcaaattgtaggaaaataattaataattacttaaactttttgaataagatgaat 216
||| ||||||| || ||||| ||| |||||||||||||| ||||||||||||| ||||
Sbjct: 133 aataaatcaaacgatatgaaaaaaataaataattacttaaattttttgaataagacgaat 74
Query: 217 ggtcaaa 223
| |||||
Sbjct: 73 gatcaaa 67
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 199 tttttgaataagatgaatggtcaaacatgt 228
||||||||||||| ||||||||||||||||
Sbjct: 183 tttttgaataagacgaatggtcaaacatgt 212
>49028_osa-miR806e:pmrd
Length = 255
Score = 99.6 bits (50), Expect = 1e-21
Identities = 132/162 (81%), Gaps = 13/162 (8%)
Strand = Plus / Minus
Query: 65 acatgtttgactgttcgttttattcaaaaatttttgtgaaatatgtaaaactatatgcat 124
||||||||||| |||||| ||||| ||||| ||||||||||||||||||| ||||||| |
Sbjct: 203 acatgtttgaccgttcgtcttatttaaaaacttttgtgaaatatgtaaaattatatgcct 144
Query: 125 acattatatgtatacattaaagtatatttaacaattaatcaaattgtaggaaaataatta 184
|||| | || ||||||||||||| ||| |||| || ||||| |||||
Sbjct: 143 acataa-------------aaatatatttaacaataaattaaatgataagaaaagaatta 97
Query: 185 ataattacttaaactttttgaataagatgaatggtcaaacat 226
||||||||||||| ||||||||||||| ||| ||||||||||
Sbjct: 96 ataattacttaaattttttgaataagacgaacggtcaaacat 55
Score = 52.0 bits (26), Expect = 2e-07
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 37 aaatgtttgacgccgtgaacttttttaaacatgtttgactgttcgttttattcaaaaa 94
|||||||||||||||| ||||||| | ||||||||| |||||| |||||||||||
Sbjct: 25 aaatgtttgacgccgttgactttttagcatatgtttgaccgttcgtcttattcaaaaa 82
>49029_osa-miR806f:pmrd
Length = 241
Score = 89.7 bits (45), Expect = 1e-18
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 20 atacaccctcctttcctaaatgtttgacgccgtgaacttttttaaacatgtttgactgtt 79
|||| |||||| || | |||| |||||| |||| ||||||| |||||||||||||||
Sbjct: 241 atactccctccgtttcgaaatatttgacaccgttgactttttagcacatgtttgactgtt 182
Query: 80 cgttttattcaaaaatttttgtgaaatatgtaaaactatatgcatacat 128
||| ||||||||||| |||| |||||||||||||| ||||||| |||||
Sbjct: 181 cgtcttattcaaaaacttttatgaaatatgtaaaattatatgcctacat 133
Score = 61.9 bits (31), Expect = 3e-10
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 38 aatgtttgacgccgtgaacttttttaaacatgtttgactgttcgttttattcaaaaattt 97
||||||||||||||| ||||||| ||||||||||| |||||| ||||||||||| ||
Sbjct: 19 aatgtttgacgccgttgactttttattacatgtttgaccgttcgtcttattcaaaaaatt 78
Query: 98 ttg 100
|||
Sbjct: 79 ttg 81
>49025_osa-miR806b:pmrd
Length = 215
Score = 87.7 bits (44), Expect = 4e-18
Identities = 87/100 (87%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 127 attatatgtatacattaaagtatatttaacaattaatcaaattgtaggaaaataattaat 186
||||||||| ||||| ||||||||||||||||| |||||||| || |||| ||| |||
Sbjct: 135 attatatgtgtacatgaaagtatatttaacaatgaatcaaatgatataaaaagaataaat 76
Query: 187 aattacttaaa-ctttttgaataagatgaatggtcaaaca 225
||||||||||| ||||||||||||| |||| ||||||||
Sbjct: 75 aattacttaaatttttttgaataagacgaatagtcaaaca 36
>49027_osa-miR806d:pmrd
Length = 271
Score = 85.7 bits (43), Expect = 2e-17
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 143 aaagtatatttaacaattaatcaaattgtaggaaaataattaataattacttaaactttt 202
||||||||||||||||| |||||||| || ||||| ||| |||||||| ||||| ||||
Sbjct: 145 aaagtatatttaacaatgaatcaaatgatatgaaaagaataaataattatttaaattttt 86
Query: 203 tgaataagatgaatggtcaaaca 225
||||||| | |||||||||||||
Sbjct: 85 tgaataaaacgaatggtcaaaca 63
>49030_osa-miR806g:pmrd
Length = 240
Score = 73.8 bits (37), Expect = 7e-14
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 37 aaatgtttgacgccgtgaacttttttaaacatgtttgactgttcgttttattcaaaaatt 96
||||||||||| |||| ||||||| ||||||||||| |||||| |||||||||||
Sbjct: 224 aaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtcttattcaaaaaag 165
Query: 97 tttgtgaaatatgtaaaacta 117
|| ||||||||||||||||||
Sbjct: 164 ttagtgaaatatgtaaaacta 144
Score = 44.1 bits (22), Expect = 6e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 199 tttttgaataagatgaatggtcaaacatgt 228
||||||||||||| ||| ||||||||||||
Sbjct: 167 tttttgaataagacgaacggtcaaacatgt 196
>48794_oni-miR812:pmrd
Length = 172
Score = 67.9 bits (34), Expect = 4e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 175 aaaataattaataattacttaaactttttgaataagatgaatggtcaaacatgt 228
||||||| | |||||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 108 aaaataaattataattacataaagtttttgaataagacgaatggtcaaacatgt 161
Score = 44.1 bits (22), Expect = 6e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 65 acatgtttgactgttcgttttattcaaaaatttt 98
||||||||||| ||||||||||| |||||||||
Sbjct: 12 acatgtttgaccattcgttttatttaaaaatttt 45
Score = 40.1 bits (20), Expect = 0.001
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 189 ttacttaaactttttgaataagatgaatggtcaaacatgt 228
|||| |||| ||||| ||||| | ||||||||||||||||
Sbjct: 51 ttacataaaatttttaaataaaacgaatggtcaaacatgt 12
>49189_osa-miR1884a:pmrd
Length = 214
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 199 tttttgaataagatgaatggtcaaac 224
||||||||||||||||||||||||||
Sbjct: 153 tttttgaataagatgaatggtcaaac 178
Score = 44.1 bits (22), Expect = 6e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 199 tttttgaataagatgaatggtcaaac 224
||||||||||||| ||||||||||||
Sbjct: 61 tttttgaataagacgaatggtcaaac 36
