miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51400_ppt-miR477b:pmrd
Length = 170
Score = 337 bits (170), Expect = 2e-93
Identities = 170/170 (100%)
Strand = Plus / Plus
Query: 1 atgtgttggaacttgggaagcaggtgcttgatcctctccctcaaaggcttccaacagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtgttggaacttgggaagcaggtgcttgatcctctccctcaaaggcttccaacagcat 60
Query: 61 gagctagttttagtgtctcaaatattgtctgttgaggctagctcctgttcagatctgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagctagttttagtgtctcaaatattgtctgttgaggctagctcctgttcagatctgtta 120
Query: 121 gaagcctctgtgggagaggagcaatcagctgctgagtggcacctctgatc 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaagcctctgtgggagaggagcaatcagctgctgagtggcacctctgatc 170
>51402_ppt-miR477d:pmrd
Length = 154
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 25 tgcttgatcctctccctcaaaggcttccaaca 56
|||||| |||||||||||||||||||||||||
Sbjct: 22 tgcttgttcctctccctcaaaggcttccaaca 53
>51401_ppt-miR477c:pmrd
Length = 85
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 tcctctccctcaaaggcttccaac 55
||||||||||||||||||||||||
Sbjct: 10 tcctctccctcaaaggcttccaac 33
>51403_ppt-miR477e:pmrd
Length = 127
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 34 ctctccctcaaaggcttccaaca 56
|||||||||||||||||||||||
Sbjct: 34 ctctccctcaaaggcttccaaca 56
>51404_ppt-miR477f:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 35 tctccctcaaaggcttccaaca 56
||||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaaca 33
>51405_ppt-miR477h:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 35 tctccctcaaaggcttccaac 55
|||||||||||||||||||||
Sbjct: 31 tctccctcaaaggcttccaac 51
>54893_vvi-miR477:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 35 tctccctcaaaggcttccaa 54
||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaa 31
