miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51402_ppt-miR477d:pmrd
Length = 154
Score = 305 bits (154), Expect = 5e-84
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 1 gttgatttcgattaaacagattgcttgttcctctccctcaaaggcttccaacaacaggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgatttcgattaaacagattgcttgttcctctccctcaaaggcttccaacaacaggta 60
Query: 61 cttggtcttgttttcaccagcaaagctaaggcccgtcccagatgttagaagcctctgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttggtcttgttttcaccagcaaagctaaggcccgtcccagatgttagaagcctctgggg 120
Query: 121 gtgacgaagcagcagctgtatgggtggttcccat 154
||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgacgaagcagcagctgtatgggtggttcccat 154
>51400_ppt-miR477b:pmrd
Length = 170
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 22 tgcttgttcctctccctcaaaggcttccaaca 53
|||||| |||||||||||||||||||||||||
Sbjct: 25 tgcttgatcctctccctcaaaggcttccaaca 56
>51404_ppt-miR477f:pmrd
Length = 127
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 32 tctccctcaaaggcttccaacaacagg 58
|||||||||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaacaacagg 38
>51403_ppt-miR477e:pmrd
Length = 127
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 31 ctctccctcaaaggcttccaacaacaggt 59
||||||||||||||||||||||| |||||
Sbjct: 34 ctctccctcaaaggcttccaacatcaggt 62
>51401_ppt-miR477c:pmrd
Length = 85
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 28 ttcctctccctcaaaggcttccaac 52
|||||||||||||||||||||||||
Sbjct: 9 ttcctctccctcaaaggcttccaac 33
>51405_ppt-miR477h:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tctccctcaaaggcttccaac 52
|||||||||||||||||||||
Sbjct: 31 tctccctcaaaggcttccaac 51
>54893_vvi-miR477:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 tctccctcaaaggcttccaa 51
||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaa 31
