miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51405_ppt-miR477h:pmrd
Length = 155
Score = 307 bits (155), Expect = 1e-84
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 1 tcagagggagtatactcaggtgtttgtttttctccctcaaaggcttccaactacatcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcagagggagtatactcaggtgtttgtttttctccctcaaaggcttccaactacatcagc 60
Query: 61 attctattccacttctggcttaagatgcagtgaatttgcgttgttgttggatgccttagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attctattccacttctggcttaagatgcagtgaatttgcgttgttgttggatgccttagt 120
Query: 121 gggagatgtacatacccctgtcattgatgtgttgc 155
|||||||||||||||||||||||||||||||||||
Sbjct: 121 gggagatgtacatacccctgtcattgatgtgttgc 155
>51404_ppt-miR477f:pmrd
Length = 127
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 20 gtgtttgtttttctccctcaaaggcttccaac 51
||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtttgtttttctccctcaaaggcttccaac 32
>51403_ppt-miR477e:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tctccctcaaaggcttccaac 51
|||||||||||||||||||||
Sbjct: 35 tctccctcaaaggcttccaac 55
>51402_ppt-miR477d:pmrd
Length = 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tctccctcaaaggcttccaac 51
|||||||||||||||||||||
Sbjct: 32 tctccctcaaaggcttccaac 52
>51401_ppt-miR477c:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tctccctcaaaggcttccaac 51
|||||||||||||||||||||
Sbjct: 13 tctccctcaaaggcttccaac 33
>51400_ppt-miR477b:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tctccctcaaaggcttccaac 51
|||||||||||||||||||||
Sbjct: 35 tctccctcaaaggcttccaac 55
>54893_vvi-miR477:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tctccctcaaaggcttccaa 50
||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaa 31
