miRNEST 2.0, an integrative microRNA resource :: BLAST
>49071_osa-miR818e:pmrd
Length = 225
Score = 61.9 bits (31), Expect = 2e-10
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
||||||||||||||||||||||| || ||||||||| ||||||||| |||||||| |
Sbjct: 66 ttaaataagacgagtggtcaaacagtgcaagcaaaaa--ctcaaaatcccttatattata 9
Query: 228 ggacgg 233
||||||
Sbjct: 8 ggacgg 3
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 21 tccgtcccataatataagagattttaagtttt 52
|||||||||||||||||| |||||||||||||
Sbjct: 223 tccgtcccataatataagggattttaagtttt 192
>51209_osa-miRf11994-akr:pmrd
Length = 183
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactc 207
|||||||| ||||||||||||||| ||||||||||||
Sbjct: 40 aataagacaagtggtcaaacgttgcaagcaaaaactc 4
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactc 207
|||||||||||||||||||| ||| ||||||||||||
Sbjct: 144 aataagacgagtggtcaaacattgcaagcaaaaactc 180
>49070_osa-miR818d:pmrd
Length = 139
Score = 54.0 bits (27), Expect = 5e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 210 aaaatctcttatattgtgggacggagggagtacta 244
|||||| |||||||| |||||||||||||||||||
Sbjct: 96 aaaatcccttatattatgggacggagggagtacta 130
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttta 46
||||| |||||||||||||||||| |||||||
Sbjct: 126 actccctccgtcccataatataagggatttta 95
>51255_osa-miRf12040-akr:pmrd
Length = 102
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
||||||| |||||||| |||||||||||||||||
Sbjct: 41 caaaatcccttatattatgggacggagggagtac 8
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 10 actccctccgtcccataatataagggatttt 40
>51254_osa-miRf12039-akr:pmrd
Length = 102
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
||||||| |||||||| |||||||||||||||||
Sbjct: 41 caaaatcccttatattatgggacggagggagtac 8
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 10 actccctccgtcccataatataagggatttt 40
>50738_osa-miRf11523-akr:pmrd
Length = 108
Score = 52.0 bits (26), Expect = 2e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||||||||||
Sbjct: 96 actccctccgtcccataatataag-gattttaagtttt 60
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 217 cttatattgtgggacggagggagta 241
|||||||| ||||||||||||||||
Sbjct: 73 cttatattatgggacggagggagta 97
>49068_osa-miR818b:pmrd
Length = 113
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 21 tccgtcccataatataagagatttta 46
||||||||||||||||||||||||||
Sbjct: 3 tccgtcccataatataagagatttta 28
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 210 aaaatctcttatattgtgggacggagg 236
||||||||||||||| |||||||||||
Sbjct: 27 aaaatctcttatattatgggacggagg 1
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 21 tccgtcccataatataagagatttt 45
|||||||||||||||||| ||||||
Sbjct: 111 tccgtcccataatataagggatttt 87
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagg 236
||||||| |||||||| |||||||||||
Sbjct: 86 caaaatcccttatattatgggacggagg 113
>51250_osa-miRf12035-akr:pmrd
Length = 119
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagta 241
||||||| |||||||| ||||||||||||||||
Sbjct: 81 caaaatcccttatattatgggacggagggagta 113
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 112 actccctccgtcccataatataagggatttt 82
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 217 cttatattgtgggacggagggagta 241
|||||||| ||||||||||||||||
Sbjct: 34 cttatattatgggacggagggagta 10
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataag 38
||||| ||||||||||||||||||
Sbjct: 11 actccctccgtcccataatataag 34
>50274_osa-miRf11059-akr:pmrd
Length = 172
Score = 50.1 bits (25), Expect = 8e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 208 tcaaaatctcttatattgtgggacggagggagtacta 244
|||||||| ||||||| |||||||||||||||||||
Sbjct: 1 tcaaaatcccttatatcatgggacggagggagtacta 37
>49537_osa-miRf10322-akr:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtacta 244
||||||| |||||||| ||||||||||||||||||
Sbjct: 64 caaaatcccttatatttcgggacggagggagtacta 99
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 218 ttatattgtgggacggagggagta 241
||||||| ||||||||||||||||
Sbjct: 33 ttatattttgggacggagggagta 10
>49536_osa-miRf10321-akr:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtacta 244
||||||| |||||||| ||||||||||||||||||
Sbjct: 64 caaaatcccttatatttcgggacggagggagtacta 99
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 218 ttatattgtgggacggagggagta 241
||||||| ||||||||||||||||
Sbjct: 33 ttatattttgggacggagggagta 10
>49126_osa-miR1442:pmrd
Length = 185
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataag 38
||||||||||||||||||||||||
Sbjct: 118 actccatccgtcccataatataag 141
>54695_tae-miR1120:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 216 tcttatattgtgggacggagggagtac 242
||||||||| |||||||||||||||||
Sbjct: 43 tcttatattatgggacggagggagtac 17
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataaga 39
||||| |||||||||||||||||||
Sbjct: 19 actccctccgtcccataatataaga 43
>49069_osa-miR818c:pmrd
Length = 176
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 19 catccgtcccataatataagagatttt 45
|||||||||||||||||||| ||||||
Sbjct: 166 catccgtcccataatataagggatttt 140
>51023_osa-miRf11808-akr:pmrd
Length = 117
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
|||||||| ||||||| ||||||||||||||||
Sbjct: 37 caaaatcttttatatttagggacggagggagtac 4
Score = 40.1 bits (20), Expect = 8e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 210 aaaatctcttatattgtgggacggagggagta 241
|||||| |||||||| |||||||||||||||
Sbjct: 82 aaaatcccttatatttagggacggagggagta 113
>50531_osa-miRf11316-akr:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
|||||||||||||||| || |||||||||||||
Sbjct: 38 caaaatctcttatatttaggaacggagggagtac 5
>50275_osa-miRf11060-akr:pmrd
Length = 166
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 211 aaatctcttatattgtgggacggagggagtacta 244
||||| ||||||| |||||||||||||||||||
Sbjct: 1 aaatcccttatatcatgggacggagggagtacta 34
>49925_osa-miRf10710-akr:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 219 tatattgtgggacggagggagtacta 244
|||||| |||||||||||||||||||
Sbjct: 86 tatattctgggacggagggagtacta 111
>49818_osa-miRf10603-akr:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 217 cttatattgtgggacggagggagtac 242
|||||||| |||||||||||||||||
Sbjct: 68 cttatattttgggacggagggagtac 93
>49314_osa-miRf10099-akr:pmrd
Length = 144
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 219 tatattgtgggacggagggagtacta 244
|||||| |||||||||||||||||||
Sbjct: 36 tatattttgggacggagggagtacta 11
>49189_osa-miR1884a:pmrd
Length = 214
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgta 196
|||||||||| |||||||||||||||
Sbjct: 55 aataagacgaatggtcaaacgttgta 30
>50587_osa-miRf11372-akr:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 217 cttatattgtgggacggagggagta 241
|||||||| ||||||||||||||||
Sbjct: 31 cttatattatgggacggagggagta 7
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 217 cttatattgtgggacggagggagta 241
|||||||| ||||||||||||||||
Sbjct: 97 cttatattatgggacggagggagta 121
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataag 38
||||| ||||||||||||||||||
Sbjct: 8 actccctccgtcccataatataag 31
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataag 38
||||| ||||||||||||||||||
Sbjct: 120 actccctccgtcccataatataag 97
>49712_osa-miRf10497-akr:pmrd
Length = 172
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagta 241
||||||| |||||||| |||||||||||||||
Sbjct: 34 caaaatcccttatatttagggacggagggagta 2
>49427_osa-miRf10212-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tccgtcccataatataagagatttt 45
|||||||||||||||||| ||||||
Sbjct: 71 tccgtcccataatataagggatttt 95
>49067_osa-miR818a:pmrd
Length = 144
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 21 tccgtcccataatataagagatttt 45
|||||||||||||||||| ||||||
Sbjct: 139 tccgtcccataatataagggatttt 115
>50920_osa-miRf11705-akr:pmrd
Length = 134
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 218 ttatattgtgggacggagggagta 241
||||||| ||||||||||||||||
Sbjct: 99 ttatattttgggacggagggagta 122
>50827_osa-miRf11612-akr:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 8e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 210 aaaatctcttatattgtgggacggagggagta 241
|||||| |||||||| |||||||||||||||
Sbjct: 95 aaaatcacttatatttagggacggagggagta 126
>50259_osa-miRf11044-akr:pmrd
Length = 129
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 219 tatattgtgggacggagggagtac 242
||||||||||||||||| ||||||
Sbjct: 106 tatattgtgggacggagtgagtac 129
>49422_osa-miRf10207-akr:pmrd
Length = 165
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaac 190
||||||||||||||||||||
Sbjct: 134 aataagacgagtggtcaaac 153
>49190_osa-miR1884b:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 taagacgagtggtcaaacgt 192
||||||||||||||||||||
Sbjct: 163 taagacgagtggtcaaacgt 182
