miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51451_ppt-miR1024b:pmrd
Length = 124
Score = 246 bits (124), Expect = 3e-66
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 1 gtagacgccttgcaattcaagcagactctattatgcggctgccgcggacactacgtggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagacgccttgcaattcaagcagactctattatgcggctgccgcggacactacgtggtt 60
Query: 61 tgttgtgcttcagtctggttggattgtaggcctccgcaaaacttcatgaccatcgcaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttgtgcttcagtctggttggattgtaggcctccgcaaaacttcatgaccatcgcaact 120
Query: 121 actg 124
||||
Sbjct: 121 actg 124
>51450_ppt-miR1024a:pmrd
Length = 162
Score = 75.8 bits (38), Expect = 7e-15
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 53 acgtggtttgttgtgcttcagtctggttggattgtaggcctccgcaaaacttcatgac 110
|||||||| |||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 91 acgtggttatttgtacttcagtctggttggattgtaggcctccgcaaggcttcatgac 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 gacgccttgcaattcaagcagactctatta 33
|||||| |||||||||||||||||| ||||
Sbjct: 32 gacgccctgcaattcaagcagactcgatta 61
