miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51456_ppt-miR1027b:pmrd
Length = 142
Score = 281 bits (142), Expect = 7e-77
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 1 gtgcaagagcagatacttaagtcgaagagcatctttctatcttctcttccaatctattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcaagagcagatacttaagtcgaagagcatctttctatcttctcttccaatctattga 60
Query: 61 tctgcccttccaatactatcagatcaatagattggaagagcagatcgaaaaatgctctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctgcccttccaatactatcagatcaatagattggaagagcagatcgaaaaatgctctca 120
Query: 121 ccttaaggagagacagcgactc 142
||||||||||||||||||||||
Sbjct: 121 ccttaaggagagacagcgactc 142
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 80 cagatcaatagattggaagagcagatcgaaaaatgctct 118
||||||||||||||||||||| |||| |||| |||||||
Sbjct: 64 cagatcaatagattggaagagaagatagaaagatgctct 26
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 26 agagcatctttctatcttctcttccaatctattgatctg 64
||||||| |||| |||| |||||||||||||||||||||
Sbjct: 118 agagcatttttcgatctgctcttccaatctattgatctg 80
>51455_ppt-miR1027a:pmrd
Length = 142
Score = 281 bits (142), Expect = 7e-77
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 1 gtgcaagagcagatacttaagtcgaagagcatctttctatcttctcttccaatctattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcaagagcagatacttaagtcgaagagcatctttctatcttctcttccaatctattga 60
Query: 61 tctgcccttccaatactatcagatcaatagattggaagagcagatcgaaaaatgctctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctgcccttccaatactatcagatcaatagattggaagagcagatcgaaaaatgctctca 120
Query: 121 ccttaaggagagacagcgactc 142
||||||||||||||||||||||
Sbjct: 121 ccttaaggagagacagcgactc 142
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 80 cagatcaatagattggaagagcagatcgaaaaatgctct 118
||||||||||||||||||||| |||| |||| |||||||
Sbjct: 64 cagatcaatagattggaagagaagatagaaagatgctct 26
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 26 agagcatctttctatcttctcttccaatctattgatctg 64
||||||| |||| |||| |||||||||||||||||||||
Sbjct: 118 agagcatttttcgatctgctcttccaatctattgatctg 80
