miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51058_osa-miRf11843-akr:pmrd
Length = 150
Score = 63.9 bits (32), Expect = 5e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 164 gtgcgtggctgggtcaatagcgatcaaggcggacggaaaa 203
|||||| ||| |||||||||||||||||||||||||||||
Sbjct: 103 gtgcgttgctaggtcaatagcgatcaaggcggacggaaaa 142
Score = 58.0 bits (29), Expect = 3e-09
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 50 gttttccgtcagccttgatcgctattgacct-gccacacacgcgatatg 97
|||||||||| |||||||||||||||||||| || || |||||||||||
Sbjct: 143 gttttccgtccgccttgatcgctattgacctagcaacgcacgcgatatg 95
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 46 gattgttttccgtcagccttgatcgctattgacc 79
||||||||| |||| |||||||||||||||||||
Sbjct: 4 gattgtttttcgtccgccttgatcgctattgacc 37
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 174 gggtcaatagcgatcaaggcggacggaaaa 203
||||||||||||||||||||||||| ||||
Sbjct: 38 gggtcaatagcgatcaaggcggacgaaaaa 9
>51057_osa-miRf11842-akr:pmrd
Length = 152
Score = 63.9 bits (32), Expect = 5e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 164 gtgcgtggctgggtcaatagcgatcaaggcggacggaaaa 203
|||||| ||| |||||||||||||||||||||||||||||
Sbjct: 49 gtgcgttgctaggtcaatagcgatcaaggcggacggaaaa 10
Score = 58.0 bits (29), Expect = 3e-09
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 50 gttttccgtcagccttgatcgctattgacct-gccacacacgcgatatg 97
|||||||||| |||||||||||||||||||| || || |||||||||||
Sbjct: 9 gttttccgtccgccttgatcgctattgacctagcaacgcacgcgatatg 57
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 174 gggtcaatagcgatcaaggcggacggaaaa 203
||||||||||||||||||||||||| ||||
Sbjct: 114 gggtcaatagcgatcaaggcggacgaaaaa 143
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 46 gattgttttccgtcagccttgatcgctattgacc 79
||||||||| |||| |||||||||||||||||||
Sbjct: 148 gattgtttttcgtccgccttgatcgctattgacc 115
