miRNEST 2.0, an integrative microRNA resource :: BLAST
>48499_ghr-miR390b:pmrd
Length = 132
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 15 gaagaatctgttaagctcaggagggatagcgccatgg 51
|||||||||||||||||||||||||||||||||||||
Sbjct: 6 gaagaatctgttaagctcaggagggatagcgccatgg 42
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 104 gcgctatccatcctgagtttcatggcttcttctt 137
||||||||||||||||||||||| | ||||||||
Sbjct: 94 gcgctatccatcctgagtttcatcggttcttctt 127
>48498_ghr-miR390a:pmrd
Length = 124
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 15 gaagaatctgttaagctcaggagggatagcgccatgg 51
|||||||||||||||||||||||||||||||||||||
Sbjct: 3 gaagaatctgttaagctcaggagggatagcgccatgg 39
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 104 gcgctatccatcctgagtttcatggcttcttctt 137
||||||||||||||||||||||| | ||||||||
Sbjct: 91 gcgctatccatcctgagtttcatcggttcttctt 124
>48500_ghr-miR390c:pmrd
Length = 114
Score = 69.9 bits (35), Expect = 5e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 17 agaatctgttaagctcaggagggatagcgccatgg 51
|||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatgg 35
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 104 gcgctatccatcctgagtttcat 126
|||||||||||||||||||||||
Sbjct: 87 gcgctatccatcctgagtttcat 109
>54848_vvi-miR390:pmrd
Length = 140
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 17 agaatctgttaagctcaggagggatagcgccatg 50
||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatg 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 102 tggcgctatccatcctgagtttcatggcttcttc 135
|||||||||| ||||||||||||| || ||||||
Sbjct: 107 tggcgctatctatcctgagtttcacgggttcttc 140
>52711_ptc-miRf10889-akr:pmrd
Length = 127
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 17 agaatctgttaagctcaggagggatagcgccatg 50
||||||||||||||||||||||||||||||||||
Sbjct: 4 agaatctgttaagctcaggagggatagcgccatg 37
>51716_ptc-miR390a:pmrd
Length = 119
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 17 agaatctgttaagctcaggagggatagcgccatg 50
||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatg 34
>47212_ath-miRf10112-akr:pmrd
Length = 107
Score = 65.9 bits (33), Expect = 8e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 14 agaagaatctgttaagctcaggagggatagcgccatg 50
|||||||||||| ||||||||||||||||||||||||
Sbjct: 5 agaagaatctgtaaagctcaggagggatagcgccatg 41
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 102 tggcgctatccatcctgagtttcatggcttcttcttact 140
||||||||||||||||||||||||| | ||||||||||
Sbjct: 67 tggcgctatccatcctgagtttcattggctcttcttact 105
>46995_ath-miR390a:pmrd
Length = 107
Score = 65.9 bits (33), Expect = 8e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 14 agaagaatctgttaagctcaggagggatagcgccatg 50
|||||||||||| ||||||||||||||||||||||||
Sbjct: 5 agaagaatctgtaaagctcaggagggatagcgccatg 41
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 102 tggcgctatccatcctgagtttcatggcttcttcttact 140
||||||||||||||||||||||||| | ||||||||||
Sbjct: 67 tggcgctatccatcctgagtttcattggctcttcttact 105
>48372_bna-miR390c:pmrd
Length = 128
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 102 tggcgctatccatcctgagtttcatggcttcttctt 137
||||||||||||||||||||| ||||||||||||||
Sbjct: 83 tggcgctatccatcctgagttccatggcttcttctt 118
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 9 agtaaagaagaatctgttaagctcaggagggatagcgccatg 50
|||| ||||| | |||| ||||||||||||||||||||||||
Sbjct: 5 agtagagaagtagctgtaaagctcaggagggatagcgccatg 46
>48371_bna-miR390b:pmrd
Length = 105
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 14 agaagaatctgttaagctcaggagggatagcgccat 49
|||||||||||| |||||||||||||||||||||||
Sbjct: 5 agaagaatctgtaaagctcaggagggatagcgccat 40
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 102 tggcgctatccatcctgagtttcatggcttcttcttact 140
||||||| ||||||||||||||||| | ||||||||||
Sbjct: 65 tggcgctgtccatcctgagtttcattggctcttcttact 103
>51719_ptc-miR390d:pmrd
Length = 106
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 17 agaatctgttaagctcaggagggatagcgcc 47
|||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 102 tggcgctatccatcctgagttt 123
||||||||||||||||||||||
Sbjct: 77 tggcgctatccatcctgagttt 98
>51718_ptc-miR390c:pmrd
Length = 123
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 20 atctgttaagctcaggagggatagcgccatg 50
|||||||||||||||||||||||||||||||
Sbjct: 4 atctgttaagctcaggagggatagcgccatg 34
>51717_ptc-miR390b:pmrd
Length = 106
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 17 agaatctgttaagctcaggagggatagcgcc 47
|||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 102 tggcgctatccatcctgagtttcatggctt 131
||||||||||||||||||||||||| ||||
Sbjct: 77 tggcgctatccatcctgagtttcattgctt 106
>48370_bna-miR390a:pmrd
Length = 144
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 102 tggcgctatccatcctgagtttcatggcttcttctt 137
||||||||||||||||||||| |||||||||||||
Sbjct: 93 tggcgctatccatcctgagttctatggcttcttctt 128
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 ctgttaagctcaggagggatagcgccatg 50
|||| ||||||||||||||||||||||||
Sbjct: 28 ctgtaaagctcaggagggatagcgccatg 56
>46996_ath-miR390b:pmrd
Length = 120
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 102 tggcgctatccatcctgagtttcatggcttcttctt 137
||||||||||||||||||||| ||| ||||||||||
Sbjct: 85 tggcgctatccatcctgagttccatagcttcttctt 120
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgccatgg 51
|||||||||||||||||||||||||
Sbjct: 15 aagctcaggagggatagcgccatgg 39
>53138_ptc-miRf11316-akr:pmrd
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 gttaagctcaggagggatagcgcc 47
||||||||||||||||||||||||
Sbjct: 1 gttaagctcaggagggatagcgcc 24
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 102 tggcgctatccatcctgagttt 123
||||||||||||||||||||||
Sbjct: 70 tggcgctatccatcctgagttt 91
>48575_gma-miR390b:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 17 agaatctgttaagctcaggagggatagc 44
||||||||| ||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagc 28
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 102 tggcgctatccatcctgagtttcatggcttct 133
|||||||||| ||| |||| ||||||||||||
Sbjct: 72 tggcgctatctatcttgagcttcatggcttct 103
>47211_ath-miRf10111-akr:pmrd
Length = 71
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgccatg 50
||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 102 tggcgctatccatcctgagttt 123
||||||||||||||||||||||
Sbjct: 50 tggcgctatccatcctgagttt 71
>51391_ppt-miR390a:pmrd
Length = 137
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgccat 49
|||||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgccat 38
>48729_mtr-miR390:pmrd
Length = 90
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgccat 49
|||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgccat 23
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 104 gcgctatccatcctgagttt 123
||||||||||||||||||||
Sbjct: 71 gcgctatccatcctgagttt 90
>55055_zma-miR390:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgcc 47
|||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgcc 21
>51392_ppt-miR390b:pmrd
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgcc 47
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>48916_osa-miR390:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgcc 47
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>51394_ppt-miR390c:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 agctcaggagggatagcgcc 47
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
>51393_ppt-miR390c:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 agctcaggagggatagcgcc 47
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
