miRNEST 2.0, an integrative microRNA resource :: BLAST
>48799_oru-miR806:pmrd
Length = 242
Score = 119 bits (60), Expect = 1e-27
Identities = 93/104 (89%)
Strand = Plus / Minus
Query: 35 ttgatcttttaacacatgtttgaccgttcatcttattcaaaaacttttgtaaaatatgta 94
||||| |||| | |||||||||||||||| ||||||||||||| |||||| |||||| ||
Sbjct: 210 ttgatatttttaaacatgtttgaccgttcgtcttattcaaaaatttttgtgaaatatata 151
Query: 95 aaactatacgtatgcataaaagtatatttaacaatgaatcaaat 138
|||||||| |||| |||||||||||||||||||| ||||||||
Sbjct: 150 aaactatatgtatatataaaagtatatttaacaataaatcaaat 107
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 53 tttgaccgttcatcttattcaaaaa 77
||||||||||| |||||||||||||
Sbjct: 51 tttgaccgttcgtcttattcaaaaa 75
>49028_osa-miR806e:pmrd
Length = 255
Score = 111 bits (56), Expect = 3e-25
Identities = 119/140 (85%)
Strand = Plus / Minus
Query: 5 actccctccgtttcgttttatttgatactattgatcttttaacacatgtttgaccgttca 64
||||||||||||||| ||||||| || |||| ||||| |||||||||||||||||
Sbjct: 246 actccctccgtttcgaaatatttgacaccgttgactttttagcacatgtttgaccgttcg 187
Query: 65 tcttattcaaaaacttttgtaaaatatgtaaaactatacgtatgcataaaagtatattta 124
||||||| |||||||||||| |||||||||||| |||| | | ||||||| ||||||||
Sbjct: 186 tcttatttaaaaacttttgtgaaatatgtaaaattatatgcctacataaaaatatattta 127
Query: 125 acaatgaatcaaattataag 144
||||| ||| |||| |||||
Sbjct: 126 acaataaattaaatgataag 107
Score = 50.1 bits (25), Expect = 8e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 41 ttttaacacatgtttgaccgttcatcttattcaaaaa 77
||||| || |||||||||||||| |||||||||||||
Sbjct: 46 ttttagcatatgtttgaccgttcgtcttattcaaaaa 82
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 191 tcaaacatgtgctaaaaagtcaa 213
|||||||||||||||||||||||
Sbjct: 194 tcaaacatgtgctaaaaagtcaa 216
>49029_osa-miR806f:pmrd
Length = 241
Score = 109 bits (55), Expect = 1e-24
Identities = 115/135 (85%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcgttttatttgatactattgatcttttaacacatgtttgaccgttc 63
|||||||||||||||| ||||||| || |||| ||||| |||||||||||| ||||
Sbjct: 240 tactccctccgtttcgaaatatttgacaccgttgactttttagcacatgtttgactgttc 181
Query: 64 atcttattcaaaaacttttgtaaaatatgtaaaactatacgtatgcataaaagtatattt 123
|||||||||||||||||| | |||||||||||| |||| | | ||| ||| |||||||
Sbjct: 180 gtcttattcaaaaacttttatgaaatatgtaaaattatatgcctacatgaaaatatattt 121
Query: 124 aacaatgaatcaaat 138
|||||||||||||||
Sbjct: 120 aacaatgaatcaaat 106
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 48 acatgtttgaccgttcatcttattcaaaaacttttg 83
|||||||||||||||| ||||||||||||| |||||
Sbjct: 46 acatgtttgaccgttcgtcttattcaaaaaattttg 81
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 191 tcaaacatgtgctaaaaagtcaa 213
|||||||||||||||||||||||
Sbjct: 187 tcaaacatgtgctaaaaagtcaa 209
>49031_osa-miR806h:pmrd
Length = 271
Score = 107 bits (54), Expect = 4e-24
Identities = 87/98 (88%)
Strand = Plus / Minus
Query: 41 ttttaacacatgtttgaccgttcatcttattcaaaaacttttgtaaaatatgtaaaacta 100
||||| ||||||||||||| ||| |||||||||||||||||||| | |||||||||| ||
Sbjct: 215 ttttagcacatgtttgaccattcgtcttattcaaaaacttttgtgagatatgtaaaatta 156
Query: 101 tacgtatgcataaaagtatatttaacaatgaatcaaat 138
|| | | ||||||| ||||||||||||||||||||||
Sbjct: 155 tatgcctacataaaaatatatttaacaatgaatcaaat 118
Score = 50.1 bits (25), Expect = 8e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 41 ttttaacacatgtttgaccgttcatcttattcaaaaa 77
||||| || |||||||||||||| |||||||||||||
Sbjct: 51 ttttatcatatgtttgaccgttcgtcttattcaaaaa 87
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 191 tcaaacatgtgctaaaaagtcaa 213
|||||||||||||||||||||||
Sbjct: 199 tcaaacatgtgctaaaaagtcaa 221
>49030_osa-miR806g:pmrd
Length = 240
Score = 107 bits (54), Expect = 4e-24
Identities = 87/98 (88%)
Strand = Plus / Minus
Query: 41 ttttaacacatgtttgaccgttcatcttattcaaaaacttttgtaaaatatgtaaaacta 100
||||| ||||||||||||||||| ||||||||||||| || || |||||||||||||||
Sbjct: 203 ttttagcacatgtttgaccgttcgtcttattcaaaaaagttagtgaaatatgtaaaacta 144
Query: 101 tacgtatgcataaaagtatatttaacaatgaatcaaat 138
| || | ||| ||||||||||||||||||||||||||
Sbjct: 143 catgtgtacatgaaagtatatttaacaatgaatcaaat 106
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 191 tcaaacatgtgctaaaaagtcaa 213
|||||||||||||||||||||||
Sbjct: 187 tcaaacatgtgctaaaaagtcaa 209
>49026_osa-miR806c:pmrd
Length = 270
Score = 105 bits (53), Expect = 2e-23
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 41 ttttaacacatgtttgaccgttcatcttattcaaaaacttttgtaaaatatgtaaaacta 100
||||| ||||||||||||| ||| ||||||||||||| |||| | |||||||||||||||
Sbjct: 219 ttttagcacatgtttgaccattcgtcttattcaaaaaattttatgaaatatgtaaaacta 160
Query: 101 tacgtatgcataaaagtatatttaacaatgaatcaaa 137
|| || | ||| ||||||||||||||||| |||||||
Sbjct: 159 tatgtgtacatgaaagtatatttaacaataaatcaaa 123
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 191 tcaaacatgtgctaaaaagtcaa 213
|||||||||||||||||||||||
Sbjct: 203 tcaaacatgtgctaaaaagtcaa 225
>49027_osa-miR806d:pmrd
Length = 271
Score = 83.8 bits (42), Expect = 6e-17
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 41 ttttaacacatgtttgaccgttcatcttattcaaaaacttttgtaaaatatgtaaaacta 100
||||| |||||||||||||||| |||||||| |||| |||| |||||||||||||||
Sbjct: 217 ttttagcacatgtttgaccgttagtcttattctaaaaaaattgtgaaatatgtaaaacta 158
Query: 101 tacgtatgcataaaagtatatttaacaatgaatcaaat 138
|| || || ||||||||||||||||||||||||||
Sbjct: 157 tatgtgcatatgaaagtatatttaacaatgaatcaaat 120
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 191 tcaaacatgtgctaaaaagtcaa 213
|||||||||||||||||||||||
Sbjct: 201 tcaaacatgtgctaaaaagtcaa 223
>49025_osa-miR806b:pmrd
Length = 215
Score = 83.8 bits (42), Expect = 6e-17
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 41 ttttaacacatgtttgaccgttcatcttattcaaaaacttttgtaaaatatgtaaaacta 100
||||| ||||| ||||| |||| ||||||| ||||| ||||| |||||||||||| ||
Sbjct: 191 ttttagcacattcttgactgttcgtcttattaaaaaaaatttgtgaaatatgtaaaatta 132
Query: 101 tacgtatgcataaaagtatatttaacaatgaatcaaat 138
|| || | ||| ||||||||||||||||||||||||||
Sbjct: 131 tatgtgtacatgaaagtatatttaacaatgaatcaaat 94
>49024_osa-miR806a:pmrd
Length = 252
Score = 75.8 bits (38), Expect = 1e-14
Identities = 84/98 (85%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 41 ttttaacacatgtttgaccgttcatcttattcaaaaacttttgtaaaatatgtaaaacta 100
||||| ||||||||| ||||||| ||||||| ||| |||| | ||||| |||||||||
Sbjct: 209 ttttagcacatgtttaaccgttcgtcttatt-aaatttttttttgaaatacgtaaaacta 151
Query: 101 tacgtatgcataaaagtatatttaacaatgaatcaaat 138
|| || | ||| ||||||||||||||||||||||||||
Sbjct: 150 tatgtgtacatgaaagtatatttaacaatgaatcaaat 113
Score = 44.1 bits (22), Expect = 5e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 176 aataaaacaaacggttcaaacatgtgctaaaaagtcaa 213
||||| || ||||||| |||||||||||||||||||||
Sbjct: 179 aataagacgaacggtt-aaacatgtgctaaaaagtcaa 215
>48794_oni-miR812:pmrd
Length = 172
Score = 54.0 bits (27), Expect = 5e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 47 cacatgtttgaccgttcatcttattcaaaaacttt 81
||||||||||||| ||| |||||||||||||||||
Sbjct: 162 cacatgtttgaccattcgtcttattcaaaaacttt 128
>49189_osa-miR1884a:pmrd
Length = 214
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 52 gtttgaccgttcatcttattcaaaaa 77
|||||||| |||||||||||||||||
Sbjct: 178 gtttgaccattcatcttattcaaaaa 153
