miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49081_osa-miR819j:pmrd
Length = 175
Score = 97.6 bits (49), Expect = 3e-21
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 20 tccgtttcaggttataagactttctagcattgcctacattcatatagatgttaatgaatc 79
Score = 58.0 bits (29), Expect = 3e-09
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| || ||||| |||||||| | ||||||||||| |||||||||||||
Sbjct: 159 tccgtttcatattataaaactttctagcattgcccacattcatatatatgttaatgaatc 100
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
|||||||||||| |||||||||||||
Sbjct: 130 atgctagaaagttttataatatgaaa 155
>49080_osa-miR819i:pmrd
Length = 198
Score = 89.7 bits (45), Expect = 7e-19
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||||||
Sbjct: 34 tccgtttcaggttataagactttctagcattgtctacattcgtatagatattaatgaatc 93
Score = 50.1 bits (25), Expect = 6e-07
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||| ||| |||||||| | |||||||||||||||||||||||
Sbjct: 173 tccgtttcatattataagattttctagcattgcccgtattcatatagatgttaatgaatc 114
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
|||||||||| |||||||||||||||
Sbjct: 144 atgctagaaaatcttataatatgaaa 169
>49076_osa-miR819e:pmrd
Length = 154
Score = 89.7 bits (45), Expect = 7e-19
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 8 tccgtttcaggttataagactttctagcattgcccacattcatatagatgttaatgaatc 67
Score = 58.0 bits (29), Expect = 3e-09
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| |||||||| | ||||||||||| ||| |||||||||
Sbjct: 147 tccgtttcatattataagactttctagcattgcccacattcatatatatgctaatgaatc 88
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 118 atgctagaaagtcttataatatgaaa 143
>49075_osa-miR819d:pmrd
Length = 152
Score = 89.7 bits (45), Expect = 7e-19
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 9 tccgtttcaggttataagactttctagcattgcccacattcatatagatgttaatgaatc 68
Score = 89.7 bits (45), Expect = 7e-19
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 144 tccgtttcaggttataagactttctagcattgcccacattcatatagatgttaatgaatc 85
>49074_osa-miR819c:pmrd
Length = 154
Score = 89.7 bits (45), Expect = 7e-19
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 8 tccgtttcaggttataagactttctagcattgcccacattcatatagatgttaatgaatc 67
Score = 58.0 bits (29), Expect = 3e-09
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| ||| |||| |||||||| | ||||||||||| |||||||||||||
Sbjct: 147 tccgtttcatattataaggctttctagcattgcccacattcatatatatgttaatgaatc 88
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||| ||||||||||||||
Sbjct: 118 atgctagaaagccttataatatgaaa 143
>49072_osa-miR819a:pmrd
Length = 125
Score = 89.7 bits (45), Expect = 7e-19
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 3 tccgtttcaggttataagactttctagcattgcccacattcatatagatgttaatgaatc 62
Score = 60.0 bits (30), Expect = 7e-10
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgtta 70
||||||||| ||| |||||||| |||||||| | ||||||||||||||||||
Sbjct: 123 tccgtttcatattataagactttctagcattgcccacattcatatagatgtta 71
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 94 atgctagaaagtcttataatatgaaa 119
>49078_osa-miR819g:pmrd
Length = 147
Score = 83.8 bits (42), Expect = 5e-17
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 17 atccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaat 76
||||||||||||||| |||||||| |||||||| | ||||||||| ||||||||||||||
Sbjct: 4 atccgtttcaggttataagactttctagcattgcccacattcatagagatgttaatgaat 63
Query: 77 c 77
|
Sbjct: 64 c 64
Score = 50.1 bits (25), Expect = 6e-07
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| || |||| | ||||||||||| |||||||||||||
Sbjct: 144 tccgtttcatattataagactttctaacattacccacattcatatatatgttaatgaatc 85
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 165 tagaaagtcttataatatgaaa 186
||||||||||||||||||||||
Sbjct: 119 tagaaagtcttataatatgaaa 140
>49082_osa-miR819k:pmrd
Length = 156
Score = 81.8 bits (41), Expect = 2e-16
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||||||||| |||||||| |||||||| | | |||||||||||||||||||||||
Sbjct: 9 tccgtttcaggttataagactttctagcattgcccatattcatatagatgttaatgaatc 68
Score = 65.9 bits (33), Expect = 1e-11
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| |||||||||| ||||||||||| || ||||||||||
Sbjct: 148 tccgtttcatattataagactttctagcattgtccacattcatatatatattaatgaatc 89
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 119 atgctagaaagtcttataatatgaaa 144
>49077_osa-miR819f:pmrd
Length = 144
Score = 81.8 bits (41), Expect = 2e-16
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||||||||| |||||||| |||||||| | ||||||||||| |||||||||||||
Sbjct: 3 tccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgaatc 62
>49079_osa-miR819h:pmrd
Length = 155
Score = 73.8 bits (37), Expect = 4e-14
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatg 73
|||||||||||||| |||||||| |||||||| | ||||||||||| |||||||||
Sbjct: 9 tccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatg 64
Score = 73.8 bits (37), Expect = 4e-14
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||||||||| |||||||| | | |||||| ||||||||||| |||||||||||||
Sbjct: 148 tccgtttcaggttataagactttctcgtattgtccacattcatatatatgttaatgaatc 89
>49073_osa-miR819b:pmrd
Length = 166
Score = 73.8 bits (37), Expect = 4e-14
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||||||||| |||||||| ||||||| | |||||||||||||| ||||||||||
Sbjct: 14 tccgtttcaggttataagactttctagcattacccacattcatatagatattaatgaatc 73
Score = 65.9 bits (33), Expect = 1e-11
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| ||||||| || ||||||||||| |||||||||||||
Sbjct: 153 tccgtttcatattataagactttctagcattatcaacattcatatatatgttaatgaatc 94
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 124 atgctagaaagtcttataatatgaaa 149
>50258_osa-miRf11043-akr:pmrd
Length = 106
Score = 60.0 bits (30), Expect = 7e-10
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||| ||||||||||||||||||||
Sbjct: 100 aagactttctagcattgcccacatacatatagatgttaatgaatc 56
>50257_osa-miRf11042-akr:pmrd
Length = 114
Score = 60.0 bits (30), Expect = 7e-10
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||| ||||||||||||||||||||
Sbjct: 104 aagactttctagcattgcccacatacatatagatgttaatgaatc 60
>50002_osa-miRf10787-akr:pmrd
Length = 104
Score = 60.0 bits (30), Expect = 7e-10
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||| ||||||||||||||||||||
Sbjct: 12 aagactttctagcattgcccacatacatatagatgttaatgaatc 56
>49907_osa-miRf10692-akr:pmrd
Length = 103
Score = 60.0 bits (30), Expect = 7e-10
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| | |||||| | |||||||||||||||||||||||||
Sbjct: 2 aagactttcttgcattgcccacattcatatagatgttaatgaatc 46
Score = 60.0 bits (30), Expect = 7e-10
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | ||||||||||| |||||||||||||
Sbjct: 102 aagactttctagcattgcccacattcatataaatgttaatgaatc 58
>50929_osa-miRf11714-akr:pmrd
Length = 78
Score = 52.0 bits (26), Expect = 2e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 36 actttntagcattgtctacattcatatagatgttaatgaat 76
||||| |||||||| |||||||| |||| ||||||||||||
Sbjct: 1 actttctagcattgcctacattcttatatatgttaatgaat 41
>49416_osa-miRf10201-akr:pmrd
Length = 86
Score = 52.0 bits (26), Expect = 2e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 37 ctttntagcattgtctacattcatatagatgttaatgaatc 77
|||| |||||||| | |||| ||||||||||||||||||||
Sbjct: 7 ctttctagcattgcccacatacatatagatgttaatgaatc 47
>50523_osa-miRf11308-akr:pmrd
Length = 86
Score = 50.1 bits (25), Expect = 6e-07
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaat 76
|||||||| ||| |||||| ||||||||||| ||| ||||||||
Sbjct: 11 aagactttctagtattgtccacattcatataaatgctaatgaat 54
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaa 185
|||||||||||||||||||||||||
Sbjct: 62 atgctagaaagtcttataatatgaa 86
>54707_tae-miR1132:pmrd
Length = 154
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
||||||| || |||||||||||| ||||||||||||
Sbjct: 32 tagcattttccacattcatataggtgttaatgaatc 67
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||||| ||||||||||||
Sbjct: 112 acattcatataggtgttaatgaatc 88
>49369_osa-miRf10154-akr:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
||||||| || |||||||||| ||||||||||||||
Sbjct: 73 tagcattttccacattcatattgatgttaatgaatc 38
>49035_osa-miR808:pmrd
Length = 152
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
||||||| || |||||||||| ||||||||||||||
Sbjct: 31 tagcattttccacattcatattgatgttaatgaatc 66
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||| ||||||||||||||
Sbjct: 111 acattcatattgatgttaatgaatc 87
>50706_osa-miRf11491-akr:pmrd
Length = 146
Score = 46.1 bits (23), Expect = 1e-05
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 28 gttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||| |||||||| |||||||| | |||||||||| ||||||||||||
Sbjct: 1 gttataagactttctagcattgcccgcattcatatatgtgttaatgaatc 50
>49976_osa-miRf10761-akr:pmrd
Length = 129
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaat 187
||||||| |||||||||||||||||||
Sbjct: 27 atgctagcaagtcttataatatgaaat 1
>51170_osa-miRf11955-akr:pmrd
Length = 150
Score = 44.1 bits (22), Expect = 4e-05
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||| |||||| ||||||||||||
Sbjct: 144 aagactttctagcattgcccacatacatatatgtgttaatgaatc 100
>49361_osa-miRf10146-akr:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatat 182
||||||||||||||||||||||
Sbjct: 73 atgctagaaagtcttataatat 94
>50020_osa-miRf10805-akr:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||| ||||||||||||||
Sbjct: 46 acattcatattgatgttaatgaatc 70
>49043_osa-miR809h:pmrd
Length = 134
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||| ||||||||||||||
Sbjct: 33 acattcatattgatgttaatgaatc 57
>49039_osa-miR809d:pmrd
Length = 167
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||| ||||||||||||||
Sbjct: 51 acattcatattgatgttaatgaatc 75
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||| ||||||||||||||
Sbjct: 120 acattcatattgatgttaatgaatc 96
>49037_osa-miR809b:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||| ||||||||||||||
Sbjct: 51 acattcatattgatgttaatgaatc 75
>49036_osa-miR809a:pmrd
Length = 161
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||| ||||||||||||||
Sbjct: 116 acattcatattgatgttaatgaatc 92
>51211_osa-miRf11996-akr:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 6e-04
Identities = 43/51 (84%)
Strand = Plus / Plus
Query: 22 tttcaggttacaagactttntagcattgtctacattcatatagatgttaat 72
|||||||||| |||||||| ||| ||| ||||||||||| ||||||||
Sbjct: 12 tttcaggttataagactttctagtgttgctcacattcatatatatgttaat 62
