miRNEST 2.0, an integrative microRNA resource :: BLAST
>49068_osa-miR818b:pmrd
Length = 113
Score = 85.7 bits (43), Expect = 6e-18
Identities = 89/104 (85%), Gaps = 4/104 (3%)
Strand = Plus / Minus
Query: 8 tcccataatataagagattttgggtggatatgagatat----gtccagattcattgtatt 63
|||||||||||||| |||||||| ||||||||| |||| || ||||||||||||| |
Sbjct: 107 tcccataatataagggattttggatggatatgatatattatagtacagattcattgtact 48
Query: 64 aggatgtgtcacatccaatcaaaatctcttatattatgggacgg 107
||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 47 gagatgtatcacatccatctaaaatctcttatattatgggacgg 4
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 tcccataatataagagatttt 28
|||||||||||||||||||||
Sbjct: 7 tcccataatataagagatttt 27
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 83 caaaatctcttatattatgggacgg 107
||||||| |||||||||||||||||
Sbjct: 86 caaaatcccttatattatgggacgg 110
>50369_osa-miRf11154-akr:pmrd
Length = 74
Score = 73.8 bits (37), Expect = 2e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 21 gagattttgggtggatatgagatatgtccagattcattgtattaggatgtgtcacatcca 80
|||||||||||||||| ||| | |||||||||||||||| ||||||||||||||||||
Sbjct: 3 gagattttgggtggatgtgacgtctgtccagattcattgtgctaggatgtgtcacatcca 62
Query: 81 atcaaaatc 89
|||||||
Sbjct: 63 cccaaaatc 71
>49067_osa-miR818a:pmrd
Length = 144
Score = 69.9 bits (35), Expect = 4e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 45 tgtccagattcattgtattaggatgtgtcacatccaatcaaaatctcttatattatggga 104
|||||| ||||||||| ||| |||||||||||| | |||||||| ||||||||||||||
Sbjct: 76 tgtccaaattcattgtcctagtatgtgtcacatctactcaaaatcccttatattatggga 135
Query: 105 cgg 107
|||
Sbjct: 136 cgg 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 45 tgtccagattcattgtattaggatgtgtcacatc 78
|||||||||||||| || |||||| |||||||||
Sbjct: 68 tgtccagattcattatactaggatatgtcacatc 35
>49126_osa-miR1442:pmrd
Length = 185
Score = 58.0 bits (29), Expect = 1e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 47 tccagattcattgtattaggatgtgtcacatccaatcaaaatctcttatattatgggacg 106
|||||||||||| || ||||||||||| |||||| || ||| ||||||||||||||||
Sbjct: 185 tccagattcattttactaggatgtgtcgcatccacccattatcccttatattatgggacg 126
Query: 107 g 107
|
Sbjct: 125 g 125
>49678_osa-miRf10463-akr:pmrd
Length = 74
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 43 tatgtccagattcattgtattaggatgtgtcacatc 78
||||||||||||| ||||| ||||||||||||||||
Sbjct: 27 tatgtccagattcgttgtaataggatgtgtcacatc 62
>49069_osa-miR818c:pmrd
Length = 176
Score = 56.0 bits (28), Expect = 6e-09
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 63 taggatgtgtcacatccaatcaaaatctcttatattatgggacg 106
||||||||||||||||| |||||||| |||||||||| |||||
Sbjct: 59 taggatgtgtcacatcccttcaaaatcccttatattataggacg 16
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 tcatccatcccataatataagagattttgg 30
|||||| |||||||||||||| ||||||||
Sbjct: 167 tcatccgtcccataatataagggattttgg 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 83 caaaatctcttatattatgggacgg 107
||||||| |||||||||||||||||
Sbjct: 139 caaaatcccttatattatgggacgg 163
>51250_osa-miRf12035-akr:pmrd
Length = 119
Score = 52.0 bits (26), Expect = 9e-08
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 8 tcccataatataagagattttgggtggatatgagatatgtcc 49
|||||||||||||| |||||||||||||| ||| | ||||||
Sbjct: 102 tcccataatataagggattttgggtggatgtgatacatgtcc 61
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 67 atgtgtcacatccaatcaaaatctcttatattatgggacgg 107
|||| ||||||||| ||||||| |||||||||||||||||
Sbjct: 65 atgtatcacatccacccaaaatcccttatattatgggacgg 105
Score = 46.1 bits (23), Expect = 5e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 69 gtgtcacatccaatcaaaatctcttatattatgggacgg 107
|||||||||||| |||||| |||||||||||||||||
Sbjct: 56 gtgtcacatccacccaaaattacttatattatgggacgg 18
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 tcccataatataagagattttgggtggat 36
|||||||||||||| |||||||||||||
Sbjct: 21 tcccataatataagtaattttgggtggat 49
>50838_osa-miRf11623-akr:pmrd
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 43 tatgtccagattcattgtattaggatgtgtcacatcca 80
|||||| |||||||| ||| ||||||||||||||||||
Sbjct: 42 tatgtcaagattcatagtactaggatgtgtcacatcca 79
>49712_osa-miRf10497-akr:pmrd
Length = 172
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 67 atgtgtcacatccaatcaaaatctcttatattatgggacgg 107
||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 50 atgtgtcacatccaaccaaaatcccttatatttagggacgg 10
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 63 taggatgtgtcacatccaatcaaaatc 89
||||||||||||||||||| |||||||
Sbjct: 72 taggatgtgtcacatccaaccaaaatc 98
>50995_osa-miRf11780-akr:pmrd
Length = 116
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 45 tgtccagattcattgtattaggatgtgtcacatcca 80
||||||||||| ||||| ||||||||||| ||||||
Sbjct: 72 tgtccagattcgttgtactaggatgtgtcccatcca 37
>50891_osa-miRf11676-akr:pmrd
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 43 tatgtccagattcattgtattaggatgtgtcacatc 78
||||||||||||| | ||||||||||||||| ||||
Sbjct: 47 tatgtccagattcgtcgtattaggatgtgtcccatc 12
>49963_osa-miRf10748-akr:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 43 tatgtccagattcattgtattaggatgtgtcacatc 78
||||||||||||||| || ||||||||||||||||
Sbjct: 44 tatgtccagattcatcatactaggatgtgtcacatc 9
>49237_osa-miRf10022-akr:pmrd
Length = 138
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 50 agattcattgtattaggatgtgtcacatccaatcaa 85
||||| |||||||||||||||||||| |||| ||||
Sbjct: 99 agatttattgtattaggatgtgtcacctccactcaa 64
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 8 tcccataatataagagattttgggtggatatgag 41
|||||||||||||| ||| |||||||||| ||||
Sbjct: 2 tcccataatataagggatcttgggtggatgtgag 35
>49466_osa-miRf10251-akr:pmrd
Length = 83
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 45 tgtccagattcattgtattaggatgtgtcacatcc 79
||||||||||| | ||| |||||||||||||||||
Sbjct: 49 tgtccagattcgtagtactaggatgtgtcacatcc 15
>49240_osa-miRf10025-akr:pmrd
Length = 99
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 47 tccagattcattgtattaggatgtgtc 73
||||||||||||||| |||||||||||
Sbjct: 62 tccagattcattgtactaggatgtgtc 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 46 gtccagattcattgtattaggatgtgtcacatcc 79
|||||||||| ||||| ||||||||||| |||||
Sbjct: 39 gtccagattcgttgtactaggatgtgtcccatcc 6
>49239_osa-miRf10024-akr:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 47 tccagattcattgtattaggatgtgtc 73
||||||||||||||| |||||||||||
Sbjct: 39 tccagattcattgtactaggatgtgtc 13
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 46 gtccagattcattgtattaggatgtgtcacatcc 79
|||||||||| ||||| ||||||||||| |||||
Sbjct: 62 gtccagattcgttgtactaggatgtgtcccatcc 95
>51238_osa-miRf12023-akr:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 46 gtccagattcattgtattaggatgtgtcacatcc 79
|||||||||||||||| ||||| | |||||||||
Sbjct: 59 gtccagattcattgtactaggaggggtcacatcc 92
>50080_osa-miRf10865-akr:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 63 taggatgtgtcacatccaatcaaaatctct 92
|||||||||||||||||| ||||||||||
Sbjct: 30 taggatgtgtcacatccacccaaaatctct 1
Score = 42.1 bits (21), Expect = 8e-05
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 45 tgtccagattcattgtattaggatgtgtcacatccaatcaaaatc 89
||||||||||||| || |||||||||| ||||||| |||||||
Sbjct: 38 tgtccagattcatcatactaggatgtgttacatccacccaaaatc 82
>49427_osa-miRf10212-akr:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 82 tcaaaatctcttatattatgggacgg 107
|||||||| |||||||||||||||||
Sbjct: 97 tcaaaatcccttatattatgggacgg 72
>49233_osa-miRf10018-akr:pmrd
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 agattcattgtattaggatgtgtcacatcc 79
|||||| |||||||||||||||||| ||||
Sbjct: 55 agattcgttgtattaggatgtgtcatatcc 84
>51255_osa-miRf12040-akr:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 83 caaaatctcttatattatgggacgg 107
||||||| |||||||||||||||||
Sbjct: 41 caaaatcccttatattatgggacgg 17
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 tcccataatataagagattttgggt 32
|||||||||||||| ||||||||||
Sbjct: 20 tcccataatataagggattttgggt 44
>51254_osa-miRf12039-akr:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 83 caaaatctcttatattatgggacgg 107
||||||| |||||||||||||||||
Sbjct: 41 caaaatcccttatattatgggacgg 17
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 tcccataatataagagattttgggt 32
|||||||||||||| ||||||||||
Sbjct: 20 tcccataatataagggattttgggt 44
>51164_osa-miRf11949-akr:pmrd
Length = 148
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 49 cagattcattgtattaggatgtgtcacatccaatcaaaatc 89
||||||||| ||| ||||| ||||||||||| | |||||||
Sbjct: 107 cagattcatagtactaggacgtgtcacatcccaccaaaatc 147
>49615_osa-miRf10400-akr:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 45 tgtccagattcattgtattaggatgtgtcacatccaa 81
|||||| |||||| ||| ||||||||||| |||||||
Sbjct: 47 tgtccaaattcatagtactaggatgtgtcccatccaa 83
>49070_osa-miR818d:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 tccatcccataatataagagatttt 28
|||||||||||||||||| ||||||
Sbjct: 22 tccatcccataatataagggatttt 46
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 84 aaaatctcttatattatgggacgg 107
|||||| |||||||||||||||||
Sbjct: 96 aaaatcccttatattatgggacgg 119
>50362_osa-miRf11147-akr:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 atgtccagattcattgtattagga 67
|||||||||||| |||||||||||
Sbjct: 35 atgtccagattcgttgtattagga 12
>49635_osa-miRf10420-akr:pmrd
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 44 atgtccagattcattgtattaggatgtgtcacatcc 79
|||||||||||| |||| ||||| |||||||||||
Sbjct: 47 atgtccagattctttgtcttaggtggtgtcacatcc 12
>49071_osa-miR818e:pmrd
Length = 225
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 84 aaaatctcttatattatgggacgg 107
|||||| |||||||||||||||||
Sbjct: 199 aaaatcccttatattatgggacgg 222
