miRNEST 2.0, an integrative microRNA resource :: BLAST
>49126_osa-miR1442:pmrd
Length = 185
Score = 73.8 bits (37), Expect = 3e-14
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 53 tccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggact 112
|||||||||||| || ||||||||||| |||| |||||| ||||||| |||||||||||
Sbjct: 185 tccagattcattttactaggatgtgtcgcatccacccattatcccttatattatgggacg 126
Query: 113 gagggagta 121
|| ||||||
Sbjct: 125 gatggagta 117
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggat 33
|||||| ||||||||||||||||||||||
Sbjct: 117 tactccatccgtcccataatataagggat 145
>51255_osa-miRf12040-akr:pmrd
Length = 102
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttgg 38
|||||||||||||||||||||||||||||||||||
Sbjct: 8 gtactccctccgtcccataatataagggattttgg 42
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 81 catctacccataatcccttgtattatgggactgagggagtac 122
|||| ||||| |||||||| ||||||||||| ||||||||||
Sbjct: 49 catcgacccaaaatcccttatattatgggacggagggagtac 8
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||| |||||||||||||||||||||||
Sbjct: 94 tactccctctctcccataatataagggattttgg 61
>51254_osa-miRf12039-akr:pmrd
Length = 102
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttgg 38
|||||||||||||||||||||||||||||||||||
Sbjct: 8 gtactccctccgtcccataatataagggattttgg 42
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 81 catctacccataatcccttgtattatgggactgagggagtac 122
|||| ||||| |||||||| ||||||||||| ||||||||||
Sbjct: 49 catcgacccaaaatcccttatattatgggacggagggagtac 8
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||| |||||||||||||||||||||||
Sbjct: 94 tactccctctctcccataatataagggattttgg 61
>49070_osa-miR818d:pmrd
Length = 139
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggatttt 36
|||||||||||||||||||||||||||||||||||
Sbjct: 130 tagtactccctccgtcccataatataagggatttt 96
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagtacta 124
|||||||| ||||||||||| ||||||||||||
Sbjct: 98 aatcccttatattatgggacggagggagtacta 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||| |||| |||||||||||||||||||||
Sbjct: 15 tactctctccatcccataatataagggatttt 46
>51250_osa-miRf12035-akr:pmrd
Length = 119
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccataatataagggattttgg 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 73 atgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||| ||||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 65 atgtatcacatccacccaaaatcccttatattatgggacggagggagta 113
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||| |||||||
Sbjct: 10 tactccctccgtcccataatataagtaattttgg 43
Score = 46.1 bits (23), Expect = 6e-06
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 75 gtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||||||||| ||||| ||| ||| ||||||||||| |||||||||
Sbjct: 56 gtgtcacatccacccaaaattacttatattatgggacggagggagta 10
>50587_osa-miRf11372-akr:pmrd
Length = 126
Score = 67.9 bits (34), Expect = 2e-12
Identities = 97/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgagacgtccagattcatt 64
||||||||||||||||||||||||||||| ||||| ||||| | || ||||||| |
Sbjct: 7 tactccctccgtcccataatataagggatattggagggatgt--gctgttcagattcgta 64
Query: 65 gtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
||| ||||| ||||||||| ||| || ||||| ||||||||||| |||||||||
Sbjct: 65 gtactaggaattgtcacatccctccaaaaacccttatattatgggacggagggagta 121
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 121 tactccctccgtcccataatataagggtttttggagggatgtga 78
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 93 atcccttgtattatgggactgagggagta 121
||||||| ||||||||||| |||||||||
Sbjct: 35 atcccttatattatgggacggagggagta 7
>50274_osa-miRf11059-akr:pmrd
Length = 172
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggattttg 37
|||||||||||||||||||| |||||||||||||||
Sbjct: 37 tagtactccctccgtcccatgatataagggattttg 2
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagtacta 124
|||||||| ||| ||||||| ||||||||||||
Sbjct: 5 aatcccttatatcatgggacggagggagtacta 37
>49067_osa-miR818a:pmrd
Length = 144
Score = 63.9 bits (32), Expect = 3e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||| ||||||||| ||| ||||||||||||||| || |||||||| |||||||||||
Sbjct: 77 gtccaaattcattgtcctagtatgtgtcacatctactcaaaatcccttatattatgggac 136
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 12 tccgtcccataatataagggattttg 37
||||||||||||||||||||||||||
Sbjct: 139 tccgtcccataatataagggattttg 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 8 tccctccgtcccataatataagggattttggacagatgtga 48
||||||| ||||||| |||||||||||| ||| |||||||
Sbjct: 1 tccctccatcccatagtataagggatttgggaatgatgtga 41
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatc 84
||||||||||||| || |||||| |||||||||
Sbjct: 67 gtccagattcattatactaggatatgtcacatc 35
>50369_osa-miRf11154-akr:pmrd
Length = 74
Score = 61.9 bits (31), Expect = 1e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatccct 98
||||||||||||||| |||||||||||||||| ||||| |||||||
Sbjct: 28 gtccagattcattgtgctaggatgtgtcacatccacccaaaatccct 74
>50275_osa-miRf11060-akr:pmrd
Length = 166
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggattt 35
|||||||||||||||||||| |||||||||||||
Sbjct: 34 tagtactccctccgtcccatgatataagggattt 1
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagtacta 124
|||||||| ||| ||||||| ||||||||||||
Sbjct: 2 aatcccttatatcatgggacggagggagtacta 34
>49068_osa-miR818b:pmrd
Length = 113
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 10 cctccgtcccataatataagggattttgga 39
||||||||||||||||||||||||||||||
Sbjct: 113 cctccgtcccataatataagggattttgga 84
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 cctccgtcccataatataagggatttt 36
|||||||||||||||||||| ||||||
Sbjct: 1 cctccgtcccataatataagagatttt 27
>49537_osa-miRf10322-akr:pmrd
Length = 105
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggattttgg 38
|||||||||||||||||| |||||||||||||||||
Sbjct: 99 tagtactccctccgtcccgaaatataagggattttgg 63
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||||||||||||||| ||||||| ||||| ||||
Sbjct: 10 tactccctccgtcccaaaatataaaggattatgga 44
Score = 44.1 bits (22), Expect = 2e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 79 cacatctacccataatcccttgtattatgggactgagggagtacta 124
|||||| ||||| |||||||| |||| ||||| ||||||||||||
Sbjct: 54 cacatccacccaaaatcccttatatttcgggacggagggagtacta 99
>49536_osa-miRf10321-akr:pmrd
Length = 105
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggattttgg 38
|||||||||||||||||| |||||||||||||||||
Sbjct: 99 tagtactccctccgtcccgaaatataagggattttgg 63
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||||||||||||||| ||||||| ||||| ||||
Sbjct: 10 tactccctccgtcccaaaatataaaggattatgga 44
Score = 44.1 bits (22), Expect = 2e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 79 cacatctacccataatcccttgtattatgggactgagggagtacta 124
|||||| ||||| |||||||| |||| ||||| ||||||||||||
Sbjct: 54 cacatccacccaaaatcccttatatttcgggacggagggagtacta 99
>49069_osa-miR818c:pmrd
Length = 176
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tccgtcccataatataagggattttggacagat 44
|||||||||||||||||||||||||||| ||||
Sbjct: 164 tccgtcccataatataagggattttggagagat 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 cgtcccataatataagggattttg 37
||||| ||||||||||||||||||
Sbjct: 16 cgtcctataatataagggattttg 39
>49678_osa-miRf10463-akr:pmrd
Length = 74
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatcta 86
|||||||||| ||||| ||||||||||||||||||
Sbjct: 30 gtccagattcgttgtaataggatgtgtcacatcta 64
>49071_osa-miR818e:pmrd
Length = 225
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 cctccgtcccataatataagggatttt 36
|||||||||||||||||||||||||||
Sbjct: 225 cctccgtcccataatataagggatttt 199
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 13 ccgtcccataatataagggattttg 37
|||||| ||||||||||||||||||
Sbjct: 3 ccgtcctataatataagggattttg 27
>54695_tae-miR1120:pmrd
Length = 119
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataag 29
||||||||||||||||||||||||||
Sbjct: 17 gtactccctccgtcccataatataag 42
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataag 29
||||||||||||| |||||||||||
Sbjct: 99 tactccctccgtctcataatataag 75
>50738_osa-miRf11523-akr:pmrd
Length = 108
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagg 30
||||||||||||||||||||||||||
Sbjct: 97 tactccctccgtcccataatataagg 72
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattt 35
||||||| | ||||||||||||| ||||||||
Sbjct: 12 gtactcctttcgtcccataatattagggattt 43
>50305_osa-miRf11090-akr:pmrd
Length = 116
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||| |||||| |||||||||||||||||
Sbjct: 108 tactccctctgtcccaaaatataagggattttgg 75
>49712_osa-miRf10497-akr:pmrd
Length = 172
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||| |||||||||||||||||
Sbjct: 2 tactccctccgtccctaaatataagggattttgg 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 73 atgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||||||||||| | ||| |||||||| |||| ||||| |||||||||
Sbjct: 50 atgtgtcacatccaaccaaaatcccttatatttagggacggagggagta 2
>49427_osa-miRf10212-akr:pmrd
Length = 97
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tccgtcccataatataagggattttg 37
||||||||||||||||||||||||||
Sbjct: 71 tccgtcccataatataagggattttg 96
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||||| ||||| |||||||||||
Sbjct: 34 tactccctccgtcccctaatacaagggattttg 2
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||||||||| ||||| |||||||||
Sbjct: 5 aatcccttgtattaggggacggagggagta 34
>51023_osa-miRf11808-akr:pmrd
Length = 117
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||| |||||||||||||||
Sbjct: 113 tactccctccgtccctaaatataagggatttt 82
>50891_osa-miRf11676-akr:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatcta 86
|||||||||| | ||||||||||||||| ||||||
Sbjct: 44 gtccagattcgtcgtattaggatgtgtcccatcta 10
>50080_osa-miRf10865-akr:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 6e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatccct 98
|||||||||||| || |||||||||| ||||| ||||| |||||||
Sbjct: 39 gtccagattcatcatactaggatgtgttacatccacccaaaatccct 85
>49963_osa-miRf10748-akr:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatcta 86
|||||||||||| || ||||||||||||||||||
Sbjct: 41 gtccagattcatcatactaggatgtgtcacatcta 7
>49240_osa-miRf10025-akr:pmrd
Length = 99
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 tccagattcattgtattaggatgtgtc 79
||||||||||||||| |||||||||||
Sbjct: 62 tccagattcattgtactaggatgtgtc 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatc 84
|||||||||| ||||| ||||||||||| ||||
Sbjct: 39 gtccagattcgttgtactaggatgtgtcccatc 7
>49239_osa-miRf10024-akr:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 53 tccagattcattgtattaggatgtgtc 79
||||||||||||||| |||||||||||
Sbjct: 39 tccagattcattgtactaggatgtgtc 13
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatc 84
|||||||||| ||||| ||||||||||| ||||
Sbjct: 62 gtccagattcgttgtactaggatgtgtcccatc 94
>49925_osa-miRf10710-akr:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatata 27
||||||||||||||||||| ||||||
Sbjct: 111 tagtactccctccgtcccagaatata 86
>49818_osa-miRf10603-akr:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataag 29
||||||||||||||||| ||||||||
Sbjct: 93 gtactccctccgtcccaaaatataag 68
>49314_osa-miRf10099-akr:pmrd
Length = 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2 tagtactccctccgtcccataatata 27
||||||||||||||||||| ||||||
Sbjct: 11 tagtactccctccgtcccaaaatata 36
>49237_osa-miRf10022-akr:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 56 agattcattgtattaggatgtgtcac 81
||||| ||||||||||||||||||||
Sbjct: 99 agatttattgtattaggatgtgtcac 74
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 gtcccataatataagggattttgg 38
||||||||||||||||||| ||||
Sbjct: 1 gtcccataatataagggatcttgg 24
>49120_osa-miR1436:pmrd
Length = 161
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatat 26
||||||||||||||||||||||
Sbjct: 12 tactccctccgtcccataatat 33
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataat 24
||||||||||||||||||||
Sbjct: 142 tactccctccgtcccataat 123
>51238_osa-miRf12023-akr:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatc 84
|||||||||||||||| ||||| | ||||||||
Sbjct: 59 gtccagattcattgtactaggaggggtcacatc 91
>50995_osa-miRf11780-akr:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatc 84
|||||||||| ||||| ||||||||||| ||||
Sbjct: 71 gtccagattcgttgtactaggatgtgtcccatc 39
