miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>47061_ath-miR828:pmrd
Length = 191
Score = 379 bits (191), Expect = e-106
Identities = 191/191 (100%)
Strand = Plus / Plus
Query: 1 gtgacaaagtcacaaaagtgataaactctcctttccactttctaatgtttcttgcttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgacaaagtcacaaaagtgataaactctcctttccactttctaatgtttcttgcttaaa 60
Query: 61 tgagtattccatgtaaaaatgattcactcactcgtatgggtgggttgggttttctcttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgagtattccatgtaaaaatgattcactcactcgtatgggtgggttgggttttctcttca 120
Query: 121 tgagatgctcatttgagcaagcaatgtttggaagtgggactatttaatatcatgtatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgagatgctcatttgagcaagcaatgtttggaagtgggactatttaatatcatgtatgag 180
Query: 181 ttttatctttt 191
|||||||||||
Sbjct: 181 ttttatctttt 191
>54901_vvi-miR828a:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 gtttcttgcttaaatgagtattcca 71
|||||||||| ||||||||||||||
Sbjct: 7 gtttcttgctcaaatgagtattcca 31
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 tgagatgctcatttgagcaagcaa 144
||||||||||||||||| ||||||
Sbjct: 88 tgagatgctcatttgaggaagcaa 111
