miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>50305_osa-miRf11090-akr:pmrd
          Length = 116

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 108 tattttgggacagagggagtatgtaa 133
           ||||||||||||||||||||||||||
Sbjct: 88  tattttgggacagagggagtatgtaa 113




>49155_osa-miR1862d:pmrd
          Length = 150

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 105 gtttattttgggacagagggagta 128
           ||||||||||||||||||||||||
Sbjct: 52  gtttattttgggacagagggagta 29



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 105 gtttattttgggacagagggagtat 129
           |||||||||||||| ||||||||||
Sbjct: 99  gtttattttgggacggagggagtat 123




>50834_osa-miRf11619-akr:pmrd
          Length = 141

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 107 ttattttgggacagagggagta 128
           ||||||||||||||||||||||
Sbjct: 31  ttattttgggacagagggagta 10




>50833_osa-miRf11618-akr:pmrd
          Length = 143

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 107 ttattttgggacagagggagta 128
           ||||||||||||||||||||||
Sbjct: 112 ttattttgggacagagggagta 133




>49784_osa-miRf10569-akr:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 107 ttattttgggacagagggagta 128
           ||||||||||||||||||||||
Sbjct: 102 ttattttgggacagagggagta 123




>49783_osa-miRf10568-akr:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 107 ttattttgggacagagggagta 128
           ||||||||||||||||||||||
Sbjct: 102 ttattttgggacagagggagta 123




>49152_osa-miR1862a:pmrd
          Length = 88

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 104 ggtttattttgggacagagggagtat 129
           ||||||||||||||| ||||||||||
Sbjct: 63  ggtttattttgggacggagggagtat 88




>50234_osa-miRf11019-akr:pmrd
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 110 ttttgggacagagggagtatg 130
           |||||||||||||||||||||
Sbjct: 76  ttttgggacagagggagtatg 96




>49156_osa-miR1862e:pmrd
          Length = 93

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 105 gtttattttgggacagagggagtat 129
           |||||||||||||| ||||||||||
Sbjct: 68  gtttattttgggacggagggagtat 92




>49153_osa-miR1862b:pmrd
          Length = 199

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                   
Query: 27  ccaaaataaaccaacattgtacgg-atgtgccacatccta 65
           ||||||||||||||| | |||||| ||||| |||||||||
Sbjct: 151 ccaaaataaaccaacctcgtacggaatgtgacacatccta 112




>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 107 ttattttgggacagagggagtatg 130
           |||||||||||| |||||||||||
Sbjct: 59  ttattttgggacggagggagtatg 82