miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48340_bna-miR161:pmrd
Length = 135
Score = 268 bits (135), Expect = 1e-72
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 1 tttattgcttcgatcaatgcactgaaagtgactacaccaggatttgtttttaagtttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttattgcttcgatcaatgcactgaaagtgactacaccaggatttgtttttaagtttttg 60
Query: 61 ctctcatctatatgataaagatgaaaattagcctctgatgtagtcactttcaatgcgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctctcatctatatgataaagatgaaaattagcctctgatgtagtcactttcaatgcgttg 120
Query: 121 atcatagcatggaaa 135
|||||||||||||||
Sbjct: 121 atcatagcatggaaa 135
>47791_ath-miRf10691-akr:pmrd
Length = 135
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 tttattgcttcgatcaatgcactgaaagtgactaca 36
|||||||| |||||||||||| ||||||||||||||
Sbjct: 1 tttattgcgtcgatcaatgcattgaaagtgactaca 36
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 97 gatgtagtcactttcaatgcgttgatc 123
|||||||||||||||||||| ||||||
Sbjct: 38 gatgtagtcactttcaatgcattgatc 12
>48078_ath-miRf10978-akr:pmrd
Length = 122
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 97 gatgtagtcactttcaatgcgttgatc 123
|||||||||||||||||||| ||||||
Sbjct: 90 gatgtagtcactttcaatgcattgatc 116
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 tcgatcaatgcactgaaagtgactaca 36
|||||||||||| ||||||||||||||
Sbjct: 118 tcgatcaatgcattgaaagtgactaca 92
