miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48398_bra-miR164a:pmrd
Length = 92
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 cctccacgttggagaagcagggcacgtgcaaaccaacaaacacgagatctatctcatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctccacgttggagaagcagggcacgtgcaaaccaacaaacacgagatctatctcatgta 60
Query: 61 atttgcacgtgctccactcctccaacatgagc 92
||||||||||||||||||||||||||||||||
Sbjct: 61 atttgcacgtgctccactcctccaacatgagc 92
>48341_bna-miR164:pmrd
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 4 ccacgttggagaagcagggcacgtgcaaaccaacaaacacgagatctatctcatgtaatt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccacgttggagaagcagggcacgtgcaaaccaacaaacacgagatctatctcatgtaatt 60
Query: 64 tgcacgtgctccactcctccaacatg 89
||||||||||||||||||||||||||
Sbjct: 61 tgcacgtgctccactcctccaacatg 86
>47540_ath-miRf10440-akr:pmrd
Length = 113
Score = 79.8 bits (40), Expect = 3e-16
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 2 ctccacgttggagaagcagggcacgtgcaaaccaacaaacacga 45
||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ctccatgttggagaagcagggcacgtgcaaaccaacaaacacga 60
>47539_ath-miRf10439-akr:pmrd
Length = 115
Score = 79.8 bits (40), Expect = 3e-16
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 2 ctccacgttggagaagcagggcacgtgcaaaccaacaaacacga 45
||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 104 ctccatgttggagaagcagggcacgtgcaaaccaacaaacacga 61
>46940_ath-miR164a:pmrd
Length = 113
Score = 79.8 bits (40), Expect = 3e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 2 ctccacgttggagaagcagggcacgtgcaaaccaacaaacacga 45
||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ctccatgttggagaagcagggcacgtgcaaaccaacaaacacga 54
>51622_ptc-miR164d:pmrd
Length = 99
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 62 tttgcacgtgctccactcctccaacatgag 91
|||||||||||||| |||||||||||||||
Sbjct: 69 tttgcacgtgctcccctcctccaacatgag 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 cacgttggagaagcagggcacgtgcaaa 32
|||| |||||||||||||||||||||||
Sbjct: 6 cacgctggagaagcagggcacgtgcaaa 33
>48708_mtr-miR164a:pmrd
Length = 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 gttggagaagcagggcacgtgcaaa 32
|||||||||||||||||||||||||
Sbjct: 4 gttggagaagcagggcacgtgcaaa 28
>50414_osa-miRf11199-akr:pmrd
Length = 146
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 cgttggagaagcagggcacgtgca 30
||||||||||||||||||||||||
Sbjct: 10 cgttggagaagcagggcacgtgca 33
>48838_osa-miR164a:pmrd
Length = 156
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 cgttggagaagcagggcacgtgca 30
||||||||||||||||||||||||
Sbjct: 14 cgttggagaagcagggcacgtgca 37
>48710_mtr-miR164c:pmrd
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 gttggagaagcagggcacgtgcaa 31
||||||||||||||||||||||||
Sbjct: 4 gttggagaagcagggcacgtgcaa 27
>48547_gma-miR164:pmrd
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 gttggagaagcagggcacgtgcaa 31
||||||||||||||||||||||||
Sbjct: 9 gttggagaagcagggcacgtgcaa 32
>48419_cav-miR164:pmrd
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 gttggagaagcagggcacgtgcaa 31
||||||||||||||||||||||||
Sbjct: 9 gttggagaagcagggcacgtgcaa 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 62 tttgcacgtgctccactcctccaacatg 89
|||||||||||||| || ||||||||||
Sbjct: 63 tttgcacgtgctccccttctccaacatg 90
>54952_zma-miR164d:pmrd
Length = 216
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 ccacgttggagaagcagggcacgtgca 30
||||| |||||||||||||||||||||
Sbjct: 14 ccacgctggagaagcagggcacgtgca 40
>54949_zma-miR164a:pmrd
Length = 152
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 ccacgttggagaagcagggcacgtgca 30
||||| |||||||||||||||||||||
Sbjct: 13 ccacgctggagaagcagggcacgtgca 39
>54785_vvi-miR164a:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 gttggagaagcagggcacgtgca 30
|||||||||||||||||||||||
Sbjct: 9 gttggagaagcagggcacgtgca 31
>54414_sbi-miR164e:pmrd
Length = 205
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 gttggagaagcagggcacgtgca 30
|||||||||||||||||||||||
Sbjct: 1 gttggagaagcagggcacgtgca 23
>51862_ptc-miRf10040-akr:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 tggagaagcagggcacgtgcaaa 32
|||||||||||||||||||||||
Sbjct: 77 tggagaagcagggcacgtgcaaa 55
>51619_ptc-miR164a:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgcaaa 32
|||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcaaa 33
>51621_ptc-miR164c:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgcaa 31
||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcaa 32
>48839_osa-miR164b:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 cacgttggagaagcagggcacgtgca 30
|||| |||||||||||||||||||||
Sbjct: 4 cacggtggagaagcagggcacgtgca 29
>48709_mtr-miR164b:pmrd
Length = 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgcaa 31
||||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgcaa 27
>54956_zma-miR164h:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 4 tggagaagcagggcacgtgca 24
>54955_zma-miR164g:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>54954_zma-miR164f:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>54953_zma-miR164e:pmrd
Length = 242
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 4 tggagaagcagggcacgtgca 24
>54951_zma-miR164c:pmrd
Length = 270
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgca 38
>54950_zma-miR164b:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41
>54788_vvi-miR164d:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>54787_vvi-miR164c:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>54676_tae-miR164b:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>54413_sbi-miR164d:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>54410_sbi-miR164:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>53142_ptc-miRf11320-akr:pmrd
Length = 167
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 15 tggagaagcagggcacgtgca 35
>52901_ptc-miRf11079-akr:pmrd
Length = 171
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 15 tggagaagcagggcacgtgca 35
>51623_ptc-miR164e:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>51620_ptc-miR164b:pmrd
Length = 162
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>51348_ppl-miR164:pmrd
Length = 159
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>48843_osa-miR164f:pmrd
Length = 210
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 24 tggagaagcagggcacgtgca 44
>48840_osa-miR164c:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gttggagaagcagggcacgtgcaaa 32
||||||||||||||| |||||||||
Sbjct: 9 gttggagaagcagggtacgtgcaaa 33
>48473_csi-miR164:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>47347_ath-miRf10247-akr:pmrd
Length = 159
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgca 26
>46941_ath-miR164b:pmrd
Length = 153
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgca 30
|||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgca 23
>54411_sbi-miR164b:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgc 29
||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgc 40
>48841_osa-miR164d:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgc 29
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>46942_ath-miR164c:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tggagaagcagggcacgtgc 29
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
