miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51707_ptc-miR319a:pmrd
Length = 188
Score = 153 bits (77), Expect = 6e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 128 ttacccagtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtactt 187
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 102 ttacccagtaaatgagtgaatgatgcgggagacaaattgaatcctaagcttcctgtactt 161
Query: 188 ggactgaagggagctcccttt 208
|||||||||||||||||||||
Sbjct: 162 ggactgaagggagctcccttt 182
Score = 149 bits (75), Expect = 1e-36
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 2 taagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactc 61
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 8 taagagagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactc 67
Query: 62 attcatccaaatactgagttaaa 84
|||||||||||||||||||||||
Sbjct: 68 attcatccaaatactgagttaaa 90
>54844_vvi-miR319c:pmrd
Length = 182
Score = 137 bits (69), Expect = 4e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 3 aagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactca 62
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 9 aagagagctttcttcagtccactcatgggtggcagtaggattgaattagctgccgactca 68
Query: 63 ttcatccaaatactgagttaa 83
||||||||||||||| |||||
Sbjct: 69 ttcatccaaatactgtgttaa 89
Score = 125 bits (63), Expect = 1e-29
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 129 tacccagtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttg 188
|||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 94 tacccagtaaatgattgaatgatgcgggagacaaattggatcttaagctccctgtgcttg 153
Query: 189 gactgaagggagctccctt 207
|||||||||||||||||||
Sbjct: 154 gactgaagggagctccctt 172
>48572_gma-miR319a:pmrd
Length = 207
Score = 131 bits (66), Expect = 2e-31
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 139 atgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggactgaaggg 198
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 122 atgagtgaatgatgcgggagacaaattgaatcttaagtttcctgtacttggactgaaggg 181
Query: 199 agctcccttt 208
||||||||||
Sbjct: 182 agctcccttt 191
Score = 111 bits (56), Expect = 2e-25
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 2 taagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactc 61
|||||||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||
Sbjct: 18 taagagagctttcttcagtccactcatgggtgacagtaagattcaattagctgccgactc 77
Query: 62 attcatccaaat 73
||||||||||||
Sbjct: 78 attcatccaaat 89
>48573_gma-miR319b:pmrd
Length = 208
Score = 127 bits (64), Expect = 4e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 137 aaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggactgaag 196
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 121 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 180
Query: 197 ggagctcccttt 208
||||||||||||
Sbjct: 181 ggagctcccttt 192
Score = 95.6 bits (48), Expect = 1e-20
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 2 taagagagctttcttcagtccactcatgggtggcggtaggattt-aattagctgccgact 60
|||||||||||||||||||||||| ||||||| | || ||||| |||||||||||||||
Sbjct: 18 taagagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgact 77
Query: 61 cattcatccaaatactgagt 80
||||||||||||| ||||||
Sbjct: 78 cattcatccaaatgctgagt 97
>51708_ptc-miR319b:pmrd
Length = 185
Score = 111 bits (56), Expect = 2e-25
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 128 ttacccagtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtactt 187
||||||||||||||| ||| |||||||||||||||||| |||||||| |||||| | ||
Sbjct: 99 ttacccagtaaatgaatgagtgatgcgggagacaaattaaatcttaaacttcctatcatt 158
Query: 188 ggactgaagggagctccctttact 211
||||||||||||||||||||||||
Sbjct: 159 ggactgaagggagctccctttact 182
Score = 67.9 bits (34), Expect = 3e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 41 gatttaattagctgccgactcattcatccaaatactgagtta 82
||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 47 gatttaattagttaccgactcattcatccaaatactgagtta 88
>46884_aqc-miR319:pmrd
Length = 177
Score = 87.7 bits (44), Expect = 3e-18
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 135 gtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggactga 194
|||||||| |||||||| ||||||| ||||| |||||| ||||| ||||||||||||||
Sbjct: 104 gtaaatgaatgaatgatccgggagattaattggatcttatgcttcttgtacttggactga 163
Query: 195 agggagctccct 206
||||||||||||
Sbjct: 164 agggagctccct 175
Score = 61.9 bits (31), Expect = 2e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 4 agagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactcat 63
|||||||| |||||||||||||||| ||| | || |||| |||| |||||||||||||
Sbjct: 1 agagagctctcttcagtccactcataggtagtagtcagattcaatttgctgccgactcat 60
Query: 64 tcatcca 70
|||||||
Sbjct: 61 tcatcca 67
>51709_ptc-miR319c:pmrd
Length = 196
Score = 65.9 bits (33), Expect = 1e-11
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ttaagagagctttcttcagtccactcatgggtggcggtaggattt-aattagctgccgac 59
|||||||||||||||||||||||||||||| || | ||| ||| |||||||||||||
Sbjct: 7 ttaagagagctttcttcagtccactcatggacgggcgaagggtttggattagctgccgac 66
Query: 60 tcattcatccaaa 72
|||||||| ||||
Sbjct: 67 tcattcattcaaa 79
Score = 58.0 bits (29), Expect = 3e-09
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 138 aatgagtgaatgatgcgggagacaaattgaatcttaagcttc-ctgtacttggactgaag 196
|||| ||||||||||||||||| ||||| ||| | |||| |||| ||||||||||||
Sbjct: 119 aatgtgtgaatgatgcgggagataaatttcatccttttcttctctgtgcttggactgaag 178
Query: 197 ggagctcccttta 209
|||||||||||||
Sbjct: 179 ggagctcccttta 191
>46993_ath-miR319b:pmrd
Length = 172
Score = 65.9 bits (33), Expect = 1e-11
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 135 gtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttc-ctgtacttggactg 193
|||||||| ||||||||||| |||||||||||| |||| | |||| || | |||||||||
Sbjct: 101 gtaaatgaatgaatgatgcgagagacaaattgagtcttca-cttctctatgcttggactg 159
Query: 194 aagggagctccct 206
|||||||||||||
Sbjct: 160 aagggagctccct 172
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 agagagctttcttcagtccactcatgg 30
|||||||||||||| ||||||||||||
Sbjct: 1 agagagctttcttcggtccactcatgg 27
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 cgactcattcatccaaatac 75
||||||||||||||||||||
Sbjct: 55 cgactcattcatccaaatac 74
>48915_osa-miR319b:pmrd
Length = 197
Score = 63.9 bits (32), Expect = 5e-11
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 3 aagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactca 62
|||||||| | |||||||||||||||||| || | |||| | |||||||||||||||||
Sbjct: 10 aagagagcgtccttcagtccactcatgggcggtgctagggtcgaattagctgccgactca 69
Query: 63 ttca 66
||||
Sbjct: 70 ttca 73
>47656_ath-miRf10556-akr:pmrd
Length = 203
Score = 58.0 bits (29), Expect = 3e-09
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 4 agagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactcat 63
||||||||| ||| |||||| ||| ||| | | || |||| |||||||| |||||||||
Sbjct: 188 agagagcttccttgagtccattcacaggtcgtgatatgattcaattagcttccgactcat 129
Query: 64 tcatccaaatactgagt 80
|||||||||||| ||||
Sbjct: 128 tcatccaaataccgagt 112
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 87 taaatgaatgaatgatgcggtagacaaattg 57
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 37 ttggactgaagggagctccct 17
>46992_ath-miR319a:pmrd
Length = 176
Score = 58.0 bits (29), Expect = 3e-09
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 4 agagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactcat 63
||||||||| ||| |||||| ||| ||| | | || |||| |||||||| |||||||||
Sbjct: 3 agagagcttccttgagtccattcacaggtcgtgatatgattcaattagcttccgactcat 62
Query: 64 tcatccaaatactgagt 80
|||||||||||| ||||
Sbjct: 63 tcatccaaataccgagt 79
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 104 taaatgaatgaatgatgcggtagacaaattg 134
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccct 174
>55050_zma-miR319b:pmrd
Length = 213
Score = 56.0 bits (28), Expect = 1e-08
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 3 aagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactca 62
|||||||| | |||||||||||||| ||| || | |||| | |||||||||||||||||
Sbjct: 20 aagagagcgtccttcagtccactcaggggcggtgctagggtcgaattagctgccgactca 79
Query: 63 ttca 66
||||
Sbjct: 80 ttca 83
>54468_sbi-miR319:pmrd
Length = 249
Score = 56.0 bits (28), Expect = 1e-08
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 3 aagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactca 62
|||||||| | |||||||||||||| ||| || | |||| | |||||||||||||||||
Sbjct: 32 aagagagcgtccttcagtccactcaggggcggtgctagggtcgaattagctgccgactca 91
Query: 63 ttca 66
||||
Sbjct: 92 ttca 95
>54846_vvi-miR319f:pmrd
Length = 193
Score = 54.0 bits (27), Expect = 4e-08
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 1 ttaagagagctttcttcagtccactcatgggtggcggta--ggatttaattagctgccga 58
|||||||||||| ||||||||||||||||| ||| | || || || ||||||||||||
Sbjct: 7 ttaagagagcttccttcagtccactcatggatgg-gttaggggtttggattagctgccga 65
Query: 59 ctcattcatccaaa 72
||||||||| ||||
Sbjct: 66 ctcattcattcaaa 79
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 180 ctgtacttggactgaagggagctccctt 207
|||| |||||||||||||||||||||||
Sbjct: 156 ctgtgcttggactgaagggagctccctt 183
>54754_tar-miR159:pmrd
Length = 192
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||||||||||| ||||
Sbjct: 52 aattagcttccgactcattcatccaaataccgagt 86
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccct 181
>54670_svi-miR159:pmrd
Length = 191
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||||||||||| ||||
Sbjct: 52 aattagcttccgactcattcatccaaataccgagt 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 111 taaatgaatgaatgatgcggtagacaaattg 141
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccct 181
>48694_mma-miR159:pmrd
Length = 192
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||||||||||| ||||
Sbjct: 52 aattagcttccgactcattcatccaaataccgagt 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 111 taaatgaatgaatgatgcggtagacaaattg 141
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccct 181
>48479_fal-miR159:pmrd
Length = 192
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||||||||||| ||||
Sbjct: 52 aattagcttccgactcattcatccaaataccgagt 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 111 taaatgaatgaatgatgcggtagacaaattg 141
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccct 181
>48478_ech-miR159:pmrd
Length = 192
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||||||||||| ||||
Sbjct: 52 aattagcttccgactcattcatccaaataccgagt 86
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccctt 207
||||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccctt 182
>48429_crb-miR159:pmrd
Length = 194
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||||||||||| ||||
Sbjct: 52 aattagcttccgactcattcatccaaataccgagt 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 113 taaatgaatgaatgatgcggtagacaaattg 143
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctcccttt 208
|||||||||||||||||||||||
Sbjct: 163 ttggactgaagggagctcccttt 185
>48422_cor-miR159:pmrd
Length = 193
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||||||||||| ||||
Sbjct: 52 aattagcttccgactcattcatccaaataccgagt 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 112 taaatgaatgaatgatgcggtagacaaattg 142
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctccct 182
>48421_cmi-miR159:pmrd
Length = 193
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||||||||||| ||||
Sbjct: 52 aattagcttccgactcattcatccaaataccgagt 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 112 taaatgaatgaatgatgcggtagacaaattg 142
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctccct 182
>48415_bvl-miR159:pmrd
Length = 192
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||||||||||| ||||
Sbjct: 52 aattagcttccgactcattcatccaaataccgagt 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 111 taaatgaatgaatgatgcggtagacaaattg 141
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccct 181
>46860_ape-miR159:pmrd
Length = 192
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||||||||||| ||||
Sbjct: 52 aattagcttccgactcattcatccaaataccgagt 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 111 taaatgaatgaatgatgcggtagacaaattg 141
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccct 181
>46856_ahi-miR159:pmrd
Length = 192
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||||||||||| ||||
Sbjct: 52 aattagcttccgactcattcatccaaataccgagt 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 111 taaatgaatgaatgatgcggtagacaaattg 141
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccct 181
>46855_aha-miR159:pmrd
Length = 192
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||||||||||| ||||
Sbjct: 52 aattagcttccgactcattcatccaaataccgagt 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 111 taaatgaatgaatgatgcggtagacaaattg 141
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccct 181
>46846_acb-miR159:pmrd
Length = 191
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||||||||||| ||||
Sbjct: 51 aattagcttccgactcattcatccaaataccgagt 85
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 110 taaatgaatgaatgatgcggtagacaaattg 140
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 160 ttggactgaagggagctccct 180
>54391_rin-miR159:pmrd
Length = 192
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 41 gatttaattagctgccgactcattcatccaaata 74
|||| |||||||| ||||||||||||||||||||
Sbjct: 47 gattcaattagcttccgactcattcatccaaata 80
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 111 taaatgaatgaatgatgcggtagacaaattg 141
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccct 181
>51710_ptc-miR319d:pmrd
Length = 193
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 180 ctgtacttggactgaagggagctcccttta 209
|||| |||||||||||||||||||||||||
Sbjct: 159 ctgtgcttggactgaagggagctcccttta 188
Score = 50.1 bits (25), Expect = 7e-07
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ttaagagagctttcttcagtccactcatgggtggcggtaggattt-aattagctgccgac 59
|||| ||||||| ||||||||||||||||| || | ||| ||| |||||||||||||
Sbjct: 7 ttaacagagcttccttcagtccactcatggacgggcgaagggtttggattagctgccgac 66
Query: 60 tcattcatccaaa 72
|||||||| ||||
Sbjct: 67 tcattcattcaaa 79
>55051_zma-miR319c:pmrd
Length = 216
Score = 50.1 bits (25), Expect = 7e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 3 aagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactca 62
||||||||| |||||||||||||| |||| ||||| ||| ||||||||||||||||
Sbjct: 19 aagagagctctcttcagtccactctaaaatggctgtagggtttcattagctgccgactca 78
Query: 63 t 63
|
Sbjct: 79 t 79
>55049_zma-miR319a:pmrd
Length = 209
Score = 50.1 bits (25), Expect = 7e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 3 aagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactca 62
||||||||| |||||||||||||| |||| ||||| ||| ||||||||||||||||
Sbjct: 19 aagagagctctcttcagtccactctgaaatggctgtagggtttcattagctgccgactca 78
Query: 63 t 63
|
Sbjct: 79 t 79
>48914_osa-miR319a:pmrd
Length = 191
Score = 50.1 bits (25), Expect = 7e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 3 aagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactca 62
||||||||| |||||||||||||| | |||| ||||| ||| |||||||||||| |||
Sbjct: 9 aagagagctctcttcagtccactctcagatggctgtagggttttattagctgccgaatca 68
Query: 63 t 63
|
Sbjct: 69 t 69
>55052_zma-miR319d:pmrd
Length = 212
Score = 48.1 bits (24), Expect = 3e-06
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 3 aagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactca 62
|||||||| | |||||||||||||| ||| || | |||| | ||||||||||||||||
Sbjct: 19 aagagagcgtccttcagtccactcaggggcggtgctagggtcggattagctgccgactca 78
Query: 63 ttca 66
||||
Sbjct: 79 ttca 82
>51351_ppl-miR319:pmrd
Length = 204
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 40 ggatttaattagctgccgactcattcat 67
||||| ||||||||||||||||||||||
Sbjct: 48 ggattgaattagctgccgactcattcat 75
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 180 ctgtacttggactgaagggagctcc 204
|||| ||||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctcc 192
>54843_vvi-miR319b:pmrd
Length = 194
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 185 cttggactgaagggagctccctt 207
|||||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccctt 184
>54583_smo-miR319:pmrd
Length = 215
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 185 cttggactgaagggagctccctt 207
|||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccctt 207
>52451_ptc-miRf10629-akr:pmrd
Length = 170
Score = 46.1 bits (23), Expect = 1e-05
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 7 gagctttcttcagtccactcatgggtggcggtaggattta-attagctgccgactcattc 65
|||||| ||||||||||||||||| || | ||| ||| |||||||||||||||||||
Sbjct: 1 gagcttccttcagtccactcatggacgggcgaagggtttggattagctgccgactcattc 60
Query: 66 atccaaa 72
|| ||||
Sbjct: 61 attcaaa 67
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 180 ctgtacttggactgaagggagctc 203
|||| |||||||||||||||||||
Sbjct: 147 ctgtgcttggactgaagggagctc 170
>48788_nof-miR159:pmrd
Length = 192
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| ||||||||||||| ||||||| ||||
Sbjct: 52 aattagcttccgactcattcatacaaataccgagt 86
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccct 181
>48476_dso-miR159:pmrd
Length = 192
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcatccaaatactgagt 80
|||||||| |||||||||||||||| |||| ||||
Sbjct: 52 aattagcttccgactcattcatccacataccgagt 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 taaatgagtgaatgatgcgggagacaaattg 166
||||||| |||||||||||| ||||||||||
Sbjct: 111 taaatgactgaatgatgcggtagacaaattg 141
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccct 206
|||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccct 181
>55053_zma-miR319e:pmrd
Length = 173
Score = 44.1 bits (22), Expect = 4e-05
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 5 gagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactcatt 64
|||||| | |||||||||||||| ||| || | |||| | ||||||||||||||||||
Sbjct: 1 gagagcgtccttcagtccactcaggggcggtgctagggtcggattagctgccgactcatt 60
Query: 65 ca 66
||
Sbjct: 61 ca 62
>51712_ptc-miR319f:pmrd
Length = 202
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 46 aattagctgccgactcattcat 67
||||||||||||||||||||||
Sbjct: 55 aattagctgccgactcattcat 76
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 180 ctgtacttggactgaagggagctcc 204
|||| ||||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctcc 192
>54686_tae-miR319a:pmrd
Length = 196
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 185 cttggactgaagggagctccc 205
|||||||||||||||||||||
Sbjct: 176 cttggactgaagggagctccc 196
>51713_ptc-miR319g:pmrd
Length = 204
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 180 ctgtacttggactgaagggagctcc 204
|||| ||||||||||||||||||||
Sbjct: 170 ctgtgcttggactgaagggagctcc 194
>51390_ppt-miR319e:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 185 cttggactgaagggagctccc 205
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>51389_ppt-miR319d:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 185 cttggactgaagggagctccc 205
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>51388_ppt-miR319d:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 185 cttggactgaagggagctccc 205
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>51387_ppt-miR319d:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 185 cttggactgaagggagctccc 205
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>51386_ppt-miR319c:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 185 cttggactgaagggagctccc 205
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>48687_ltu-miR319:pmrd
Length = 167
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 185 cttggactgaagggagctccc 205
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>54847_vvi-miR319g:pmrd
Length = 222
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 186 ttggactgaagggagctccc 205
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>54380_pvu-miR319c:pmrd
Length = 734
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 185 cttggactgaagggagctcc 204
||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcc 428
>51385_ppt-miR319b:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 185 cttggactgaagggagctcc 204
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>51384_ppt-miR319a:pmrd
Length = 169
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 185 cttggactgaagggagctcc 204
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
