miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48751_mtr-miR399b:pmrd
Length = 112
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 76 cttgccaaaggagagctgccctgtga 101
||||||||||||||||||||||||||
Sbjct: 71 cttgccaaaggagagctgccctgtga 96
>54878_vvi-miR399b:pmrd
Length = 117
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 76 cttgccaaaggagagctgccctgtgact 103
||||||||||||||| ||||||||||||
Sbjct: 85 cttgccaaaggagagttgccctgtgact 112
>48753_mtr-miR399d:pmrd
Length = 129
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 cttgccaaaggagagctgccct 97
||||||||||||||||||||||
Sbjct: 88 cttgccaaaggagagctgccct 109
>55100_zma-miR399j:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgccaaaggagagctgccctg 98
|||||||||||||||||||||
Sbjct: 71 tgccaaaggagagctgccctg 91
>55094_zma-miR399d:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgccaaaggagagctgccctg 98
|||||||||||||||||||||
Sbjct: 86 tgccaaaggagagctgccctg 106
>54885_vvi-miR399i:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 79 gccaaaggagagctgccctgtgact 103
|||||||||||| ||||||||||||
Sbjct: 93 gccaaaggagagttgccctgtgact 117
>54490_sbi-miR399b:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgccaaaggagagctgccctg 98
|||||||||||||||||||||
Sbjct: 84 tgccaaaggagagctgccctg 104
>51754_ptc-miR399h:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 74 ggcttgccaaaggagagctgccctgtgac 102
||||||||||||||||| | |||||||||
Sbjct: 99 ggcttgccaaaggagagtttccctgtgac 127
>51352_ppl-miR399b:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 74 ggcttgccaaaggagagctgccctgtgac 102
||||||||||||||||| | |||||||||
Sbjct: 99 ggcttgccaaaggagagtttccctgtgac 127
>48972_osa-miR399i:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgccaaaggagagctgccctg 98
|||||||||||||||||||||
Sbjct: 86 tgccaaaggagagctgccctg 106
>54381_pvu-miR399a:pmrd
Length = 223
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 cttgccaaaggagagctgccctgt 99
||||||||||||||| ||||||||
Sbjct: 87 cttgccaaaggagagttgccctgt 110
>51755_ptc-miR399i:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 76 cttgccaaaggagagctgccctgtgact 103
||||||||||||||| |||||| |||||
Sbjct: 77 cttgccaaaggagagttgccctatgact 104
>47017_ath-miR399c:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 cttgccaaaggagagctgccctgt 99
||||||||||||||| ||||||||
Sbjct: 82 cttgccaaaggagagttgccctgt 105
