miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>51760_ptc-miR403b:pmrd
          Length = 100

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 62 atccaatggtgttagattcacgcacaaactcgtgatc 98
          ||||||||| |||||||||||||||||||||| ||||
Sbjct: 60 atccaatggcgttagattcacgcacaaactcgcgatc 96




>54888_vvi-miR403c:pmrd
          Length = 115

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 72  gttagattcacgcacaaactcgtgatc 98
           |||||||||||||||||||||||||||
Sbjct: 84  gttagattcacgcacaaactcgtgatc 110




>54889_vvi-miR403d:pmrd
          Length = 86

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 69 ggtgttagattcacgcacaaactcgtgatc 98
          ||||||||||||||||||||||||| ||||
Sbjct: 52 ggtgttagattcacgcacaaactcgggatc 81




>54887_vvi-miR403b:pmrd
          Length = 86

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 69 ggtgttagattcacgcacaaactcgtgatc 98
          ||||||||||||||||||||||||| ||||
Sbjct: 52 ggtgttagattcacgcacaaactcgggatc 81




>54886_vvi-miR403a:pmrd
          Length = 115

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 72  gttagattcacgcacaaactcgtga 96
           |||||||||||||||||||||||||
Sbjct: 84  gttagattcacgcacaaactcgtga 108




>54891_vvi-miR403f:pmrd
          Length = 108

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 67 atggtgttagattcacgcacaaactcgt 94
          ||||| ||||||||||||||||||||||
Sbjct: 72 atggtcttagattcacgcacaaactcgt 99




>54890_vvi-miR403e:pmrd
          Length = 115

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 72  gttagattcacgcacaaactcgtgatc 98
           |||||||||||||||||||||| ||||
Sbjct: 84  gttagattcacgcacaaactcgcgatc 110




>51761_ptc-miR403c:pmrd
          Length = 79

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 64 ccaatggtgttagattcacgcacaaactcg 93
          |||||||  |||||||||||||||||||||
Sbjct: 50 ccaatggctttagattcacgcacaaactcg 79




>51759_ptc-miR403a:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  ttagattcacgcacaaactcgt 94
           ||||||||||||||||||||||
Sbjct: 103 ttagattcacgcacaaactcgt 124




>51353_ppl-miR403:pmrd
          Length = 135

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  ttagattcacgcacaaactcgt 94
           ||||||||||||||||||||||
Sbjct: 103 ttagattcacgcacaaactcgt 124




>48413_bst-miR403:pmrd
          Length = 124

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  ttagattcacgcacaaactcgt 94
           ||||||||||||||||||||||
Sbjct: 90  ttagattcacgcacaaactcgt 111




>47024_ath-miR403:pmrd
          Length = 135

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  ttagattcacgcacaaactcgt 94
           ||||||||||||||||||||||
Sbjct: 103 ttagattcacgcacaaactcgt 124




>54669_stu-miR403:pmrd
          Length = 106

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 74 tagattcacgcacaaactcgt 94
          |||||||||||||||||||||
Sbjct: 72 tagattcacgcacaaactcgt 92



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 71 tgttagattcacgcacaaac 90
          ||||||||||||||||||||
Sbjct: 38 tgttagattcacgcacaaac 19




>48424_cpa-miR403:pmrd
          Length = 126

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 74  tagattcacgcacaaactcgt 94
           |||||||||||||||||||||
Sbjct: 91  tagattcacgcacaaactcgt 111




>54562_sly-miR403:pmrd
          Length = 130

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 71 tgttagattcacgcacaaac 90
          ||||||||||||||||||||
Sbjct: 54 tgttagattcacgcacaaac 35