miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48541_gma-miR159c:pmrd
Length = 185
Score = 367 bits (185), Expect = e-102
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 1 acccaagttggagctctctacactccaagtctgaaggaagtgacggtagacccttgctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acccaagttggagctctctacactccaagtctgaaggaagtgacggtagacccttgctgc 60
Query: 61 taattcatggttacctttggattcagataaggaagcatgtgaaagtcatgggtctgcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taattcatggttacctttggattcagataaggaagcatgtgaaagtcatgggtctgcatg 120
Query: 121 aatttgaagacggggctaccttgatcttttagtattggagtgaagggagctccgaattag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatttgaagacggggctaccttgatcttttagtattggagtgaagggagctccgaattag 180
Query: 181 gcctt 185
|||||
Sbjct: 181 gcctt 185
>48540_gma-miR159b:pmrd
Length = 186
Score = 65.9 bits (33), Expect = 1e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 137 taccttgatcttttagtattggagtgaagggagctcc 173
|||||||||||||| ||||||||||||||||||||||
Sbjct: 139 taccttgatcttttggtattggagtgaagggagctcc 175
>51607_ptc-miR159f:pmrd
Length = 201
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 146 cttttagtattggagtgaagggagctc 172
||||| |||||||||||||||||||||
Sbjct: 165 ctttttgtattggagtgaagggagctc 191
>54688_tae-miR319c:pmrd
Length = 253
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 attggagtgaagggagctcc 173
||||||||||||||||||||
Sbjct: 1 attggagtgaagggagctcc 20
