miRNEST 2.0, an integrative microRNA resource :: BLAST
>48500_ghr-miR390c:pmrd
Length = 114
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagcgccatggatgatc 41
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatggatgatc 41
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagtttcat 89
|||||||||||||||||||||||
Sbjct: 87 gcgctatccatcctgagtttcat 109
>48499_ghr-miR390b:pmrd
Length = 132
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagcgccatggatgatc 41
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 8 agaatctgttaagctcaggagggatagcgccatggatgatc 48
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagtttcat 89
|||||||||||||||||||||||
Sbjct: 94 gcgctatccatcctgagtttcat 116
>48498_ghr-miR390a:pmrd
Length = 124
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagcgccatggatgatc 41
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 agaatctgttaagctcaggagggatagcgccatggatgatc 45
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagtttcat 89
|||||||||||||||||||||||
Sbjct: 91 gcgctatccatcctgagtttcat 113
>47212_ath-miRf10112-akr:pmrd
Length = 107
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagcgccatg 34
||||||||||||||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccatg 41
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagtttcat 89
|||||||||||||||||||||||
Sbjct: 69 gcgctatccatcctgagtttcat 91
>46995_ath-miR390a:pmrd
Length = 107
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagcgccatg 34
||||||||||||||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccatg 41
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagtttcat 89
|||||||||||||||||||||||
Sbjct: 69 gcgctatccatcctgagtttcat 91
>48729_mtr-miR390:pmrd
Length = 90
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 54 ttgatcttctcttgcgctatccatcctgagttt 86
|||||||||||||||||||||||||||||||||
Sbjct: 58 ttgatcttctcttgcgctatccatcctgagttt 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccat 33
|||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgccat 23
>48371_bna-miR390b:pmrd
Length = 105
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagcgccat 33
|||||||||||||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccat 40
>54848_vvi-miR390:pmrd
Length = 140
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagcgccatg 34
||||||||| ||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatg 34
>52711_ptc-miRf10889-akr:pmrd
Length = 127
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagcgccatg 34
||||||||| ||||||||||||||||||||||||
Sbjct: 4 agaatctgttaagctcaggagggatagcgccatg 37
>51716_ptc-miR390a:pmrd
Length = 119
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagcgccatg 34
||||||||| ||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatg 34
>48372_bna-miR390c:pmrd
Length = 128
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 ctgtaaagctcaggagggatagcgccatg 34
|||||||||||||||||||||||||||||
Sbjct: 18 ctgtaaagctcaggagggatagcgccatg 46
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagtttcatggcttct 96
||||||||||||||||||| ||||||||||
Sbjct: 85 gcgctatccatcctgagttccatggcttct 114
>48370_bna-miR390a:pmrd
Length = 144
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 ctgtaaagctcaggagggatagcgccatg 34
|||||||||||||||||||||||||||||
Sbjct: 28 ctgtaaagctcaggagggatagcgccatg 56
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagtttcatggcttct 96
||||||||||||||||||| |||||||||
Sbjct: 95 gcgctatccatcctgagttctatggcttct 124
>48575_gma-miR390b:pmrd
Length = 103
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagc 28
>51719_ptc-miR390d:pmrd
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagcgcc 31
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagttt 86
||||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagttt 98
>51718_ptc-miR390c:pmrd
Length = 123
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 4 atctgtaaagctcaggagggatagcgccatg 34
|||||| ||||||||||||||||||||||||
Sbjct: 4 atctgttaagctcaggagggatagcgccatg 34
>51717_ptc-miR390b:pmrd
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagcgcc 31
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagtttcatggctt 94
||||||||||||||||||||||| ||||
Sbjct: 79 gcgctatccatcctgagtttcattgctt 106
>46996_ath-miR390b:pmrd
Length = 120
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 9 taaagctcaggagggatagcgccatgg 35
|||||||||||||||||||||||||||
Sbjct: 13 taaagctcaggagggatagcgccatgg 39
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagtttcatggcttct 96
||||||||||||||||||| ||| ||||||
Sbjct: 87 gcgctatccatcctgagttccatagcttct 116
>47211_ath-miRf10111-akr:pmrd
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatg 34
||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagttt 86
||||||||||||||||||||
Sbjct: 52 gcgctatccatcctgagttt 71
>51391_ppt-miR390a:pmrd
Length = 137
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccat 33
|||||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgccat 38
>55055_zma-miR390:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgcc 31
|||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgcc 21
>53138_ptc-miRf11316-akr:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgcc 31
|||||||||||||||||||||
Sbjct: 4 aagctcaggagggatagcgcc 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagttt 86
||||||||||||||||||||
Sbjct: 72 gcgctatccatcctgagttt 91
>51392_ppt-miR390b:pmrd
Length = 175
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgcc 31
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>48916_osa-miR390:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgcc 31
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>51394_ppt-miR390c:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agctcaggagggatagcgcc 31
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
>51393_ppt-miR390c:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agctcaggagggatagcgcc 31
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
