miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>51918_ptc-miRf10096-akr:pmrd
          Length = 121

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                      
Query: 15 gcaaagtgttgctaacagagtttattggcattctgtccacctcc 58
          |||||| ||| || ||||||||||||||||||||||||||||||
Sbjct: 1  gcaaagggtttcttacagagtttattggcattctgtccacctcc 44



 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 95  atatggaggtgggcatactgtcaactgagctctgttgg 132
           |||||||||||||||||||| |||| ||||||||||||
Sbjct: 73  atatggaggtgggcatactgccaaccgagctctgttgg 110




>54852_vvi-miR394b:pmrd
          Length = 93

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 29 acagagtttattggcattctgtccacctcc 58
          ||||||||||||||||||||||||||||||
Sbjct: 1  acagagtttattggcattctgtccacctcc 30



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 98  tggaggtgggcatactgtcaactgagctctgtt 130
           ||||||||||||||||| ||||  |||||||||
Sbjct: 61  tggaggtgggcatactgccaaccaagctctgtt 93




>54853_vvi-miR394c:pmrd
          Length = 102

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 ttggcattctgtccacctcca 59
          |||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcca 31




>54851_vvi-miR394a:pmrd
          Length = 89

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 ttggcattctgtccacctcca 59
          |||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcca 31




>48502_ghr-miR394:pmrd
          Length = 97

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 ttggcattctgtccacctcca 59
          |||||||||||||||||||||
Sbjct: 1  ttggcattctgtccacctcca 21




>55065_zma-miR394b:pmrd
          Length = 122

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 39 ttggcattctgtccacctcc 58
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>55064_zma-miR394a:pmrd
          Length = 126

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 39 ttggcattctgtccacctcc 58
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>54472_sbi-miR394b:pmrd
          Length = 111

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 39 ttggcattctgtccacctcc 58
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>54471_sbi-miR394a:pmrd
          Length = 110

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 39 ttggcattctgtccacctcc 58
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>48920_osa-miR394:pmrd
          Length = 110

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 39 ttggcattctgtccacctcc 58
          ||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33




>47001_ath-miR394b:pmrd
          Length = 121

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 39 ttggcattctgtccacctcc 58
          ||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33




>47000_ath-miR394a:pmrd
          Length = 117

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 39 ttggcattctgtccacctcc 58
          ||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33