miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54765_vun-miR2118:pmrd
Length = 129
Score = 77.8 bits (39), Expect = 2e-15
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 60 tgttgtgttgtttattcttttgccgattccacccattcctatgattt 106
|||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 79 tgttgttttgtttatccttttgccgattccacccattcctatgattt 125
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 2 gaggaagtgatgggagatgggagggtcggtaaag 35
||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggaagtgatgggagatgggagggtcggtaaag 34
>48628_gma-miR2118:pmrd
Length = 129
Score = 77.8 bits (39), Expect = 2e-15
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 60 tgttgtgttgtttattcttttgccgattccacccattcctatgattt 106
|||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 79 tgttgttttgtttatccttttgccgattccacccattcctatgattt 125
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 2 gaggaagtgatgggagatgggagggtcggtaaag 35
||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggaagtgatgggagatgggagggtcggtaaag 34
>54385_pvu-miR2118:pmrd
Length = 95
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 77 ttttgccgattccacccattcctatgattt 106
||||||||||||||||||||||||||||||
Sbjct: 62 ttttgccgattccacccattcctatgattt 91
>48778_mtr-miR2118:pmrd
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 82 ccgattccacccattcctatgattttcttt 111
|||||||||||||||||||| |||| ||||
Sbjct: 58 ccgattccacccattcctattatttccttt 87
