miRNEST 2.0, an integrative microRNA resource :: BLAST
>48698_mtr-miR157:pmrd
Length = 111
Score = 220 bits (111), Expect = 2e-58
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 6 ttgacagaagatagagggcactaaggatgatatgcatacacatatatatacaacatggag 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagggcactaaggatgatatgcatacacatatatatacaacatggag 60
Query: 66 gaggagcttaattgcatttcatttcctttgtgctctctagacttctgtcat 116
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaggagcttaattgcatttcatttcctttgtgctctctagacttctgtcat 111
>51598_ptc-miR156h:pmrd
Length = 103
Score = 65.9 bits (33), Expect = 6e-12
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 68 ggagcttaattgcatttcatttcctttgtgctctctagacttctgtcatcacc 120
||||||||||||||| ||| | |||||||||||||||| ||||||||||||||
Sbjct: 48 ggagcttaattgcatctcact-cctttgtgctctctagtcttctgtcatcacc 99
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagggcactaaggatgatatgcat 42
|||||||||||||||||| ||||| | ||||| ||||||
Sbjct: 9 tgttgacagaagatagagagcactgacgatgaaatgcat 47
>51597_ptc-miR156g:pmrd
Length = 103
Score = 65.9 bits (33), Expect = 6e-12
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 68 ggagcttaattgcatttcatttcctttgtgctctctagacttctgtcatcacc 120
||||||||||||||| ||| | |||||||||||||||| ||||||||||||||
Sbjct: 48 ggagcttaattgcatctcact-cctttgtgctctctagtcttctgtcatcacc 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gttgttgacagaagatagagggcac 26
|||||||||||||||||||| ||||
Sbjct: 7 gttgttgacagaagatagagagcac 31
>48393_bra-miR157a:pmrd
Length = 149
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 ggttgttgacagaagatagagggcactaaggatgatatgca 41
||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 9 ggttgttgacagaagatagagagcactaaggatgacatgca 49
>48384_bol-miR157a:pmrd
Length = 106
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 ggttgttgacagaagatagagggcactaaggatgatatgca 41
||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 1 ggttgttgacagaagatagagagcactaaggatgacatgca 41
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 92 tttgtgctctctagacttctgtca 115
||||||||||||| ||||||||||
Sbjct: 78 tttgtgctctctatacttctgtca 101
>48338_bna-miR156c:pmrd
Length = 155
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 ggttgttgacagaagatagagggcactaaggatgatatgca 41
||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 13 ggttgttgacagaagatagagagcactaaggatgacatgca 53
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 92 tttgtgctctctagacttctgtca 115
||||||||||||| ||||||||||
Sbjct: 114 tttgtgctctctatacttctgtca 137
>48337_bna-miR156b:pmrd
Length = 208
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 ggttgttgacagaagatagagggcactaaggatgatatgca 41
||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 20 ggttgttgacagaagatagagagcactaaggatgacatgca 60
>46926_ath-miR157c:pmrd
Length = 217
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 ggttgttgacagaagatagagggcactaaggatgatatgca 41
||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 19 ggttgttgacagaagatagagagcactaaggatgacatgca 59
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 92 tttgtgctctctagacttctgtcatcacc 120
||||||||||||| |||||||||| ||||
Sbjct: 165 tttgtgctctctatacttctgtcaccacc 193
>54772_vvi-miR156g:pmrd
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 89 tcctttgtgctctctagacttctgtcatcacc 120
||||||||||||||||||||||||||||||||
Sbjct: 64 tcctttgtgctctctagacttctgtcatcacc 95
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gttgttgacagaagatagagggcac 26
|||||||||||||||||||| ||||
Sbjct: 7 gttgttgacagaagatagagagcac 31
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 60.0 bits (30), Expect = 4e-10
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 68 ggagcttaattgcatttcatttcctttgtgctctctagacttctgtcatc 117
||||||||||||||| ||| | |||||||||||||||| |||||||||||
Sbjct: 39 ggagcttaattgcatctcact-cctttgtgctctctagtcttctgtcatc 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 5 gttgacagaagatagagggcactaaggatgatatgcat 42
||||||||||||||||| ||||| | ||||| ||||||
Sbjct: 1 gttgacagaagatagagagcactgacgatgaaatgcat 38
>46927_ath-miR157d:pmrd
Length = 221
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 ggttgttgacagaagatagagggcactaaggatgatatgca 41
||||| ||||||||||||||| |||||||||||| ||||||
Sbjct: 18 ggttgctgacagaagatagagagcactaaggatgctatgca 58
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 88 ttcctttgtgctctctagacttctgtcatcacc 120
||||| ||||||||||| ||||||||||||||
Sbjct: 166 ttcctatgtgctctctatgcttctgtcatcacc 198
>48531_gma-miR156d:pmrd
Length = 151
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 89 tcctttgtgctctctagacttctgtcatcacc 120
|||||||||||||||| |||||||||||||||
Sbjct: 105 tcctttgtgctctctatacttctgtcatcacc 136
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 1 ggttgttgacagaagatagagggcactaaggatgatatgcata 43
||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 16 ggttgttgacagaagatagagagcacagatgatgatatgcata 58
>46925_ath-miR157b:pmrd
Length = 132
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 89 tcctttgtgctctctagacttctgtcatcacc 120
||||||||||||||||| ||||||||||||||
Sbjct: 82 tcctttgtgctctctagccttctgtcatcacc 113
>46924_ath-miR157a:pmrd
Length = 98
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 89 tcctttgtgctctctagacttctgtcatcacc 120
||||||||||||||||| ||||||||||||||
Sbjct: 67 tcctttgtgctctctagccttctgtcatcacc 98
>54661_stu-miR157a:pmrd
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 6 ttgacagaagatagagggcactaaggatgatatgc 40
|||||||||||||||| ||||||| ||||||||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgatatgc 35
>54532_sly-miR156a:pmrd
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 6 ttgacagaagatagagggcactaaggatgatatgc 40
|||||||||||||||| ||||||| ||||||||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgatatgc 35
>48695_mtr-miR156e:pmrd
Length = 172
Score = 54.0 bits (27), Expect = 2e-08
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 1 ggttgttgacagaagatagagggcactaaggatgatatgcatacacatatatata 55
||||||||||||||||||||| |||| | |||||||||||| | |||||||||
Sbjct: 1 ggttgttgacagaagatagagagcacagatgatgatatgcatttatatatatata 55
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 89 tcctttgtgctctctagacttctgtcatcacc 120
|||||||||||||||| ||||||||||||||
Sbjct: 141 tcctttgtgctctctatgcttctgtcatcacc 172
>48532_gma-miR156e:pmrd
Length = 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 89 tcctttgtgctctctagacttctgtcatca 118
||||||||||||||||| ||||||||||||
Sbjct: 78 tcctttgtgctctctagtcttctgtcatca 107
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagggcactaaggatgatatgcat 42
|||||||||||||||||| ||||| | ||||| ||||||
Sbjct: 19 tgttgacagaagatagagagcactgatgatgaaatgcat 57
>54774_vvi-miR156i:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 89 tcctttgtgctctctagacttctgtcatcacc 120
|||||||||||||||| ||||||||||||||
Sbjct: 64 tcctttgtgctctctattcttctgtcatcacc 95
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gttgttgacagaagatagagggcac 26
|||||||||||||||||||| ||||
Sbjct: 7 gttgttgacagaagatagagagcac 31
>51600_ptc-miR156j:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 2 gttgttgacagaagatagagggcactaaggatgatatgca 41
|||||||||||||||||||| |||| | |||||||||||
Sbjct: 7 gttgttgacagaagatagagagcacagatgatgatatgca 46
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 89 tcctttgtgctctctagacttctgtcatcac 119
|||||||||||||||| |||||||||||||
Sbjct: 65 tcctttgtgctctctatgcttctgtcatcac 95
>48537_gma-miR157c:pmrd
Length = 84
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 89 tcctttgtgctctctagacttctgtca 115
||||||||||||||||| |||||||||
Sbjct: 27 tcctttgtgctctctagtcttctgtca 1
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 6 ttgacagaagatagagggcactaaggatgatatgcat 42
|||||||||||||||| ||||| | ||||| ||||||
Sbjct: 84 ttgacagaagatagagagcactgatgatgaaatgcat 48
>52045_ptc-miRf10223-akr:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 4 tgttgacagaagatagagggcactaaggatgatatgca 41
|||||||||||||||||| |||| | |||||||||||
Sbjct: 1 tgttgacagaagatagagagcacagatgatgatatgca 38
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 89 tcctttgtgctctctagacttctgtcatca 118
|||||||||||||||| ||||||||||||
Sbjct: 57 tcctttgtgctctctatgcttctgtcatca 86
>48631_gra-miR157b:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 89 tcctttgtgctctctagacttctgtcatca 118
|||||||||||||||| ||||||||||||
Sbjct: 60 tcctttgtgctctctatgcttctgtcatca 89
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gttgttgacagaagatagagggcac 26
|||||||||||||||||||| ||||
Sbjct: 1 gttgttgacagaagatagagagcac 25
>51599_ptc-miR156i:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gttgttgacagaagatagagggcac 26
|||||||||||||||||||| ||||
Sbjct: 7 gttgttgacagaagatagagagcac 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 89 tcctttgtgctctctagacttctgtcatcacc 120
|||||||||||||||| |||||| |||||||
Sbjct: 65 tcctttgtgctctctatgcttctgccatcacc 96
>48697_mtr-miR156h:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 88 ttcctttgtgctctctagacttctgtcatcacc 120
|||||||||||||| || ||||||||||||||
Sbjct: 62 ttcctttgtgctctttattcttctgtcatcacc 94
>48630_gra-miR157a:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gttgttgacagaagatagagggcac 26
|||||||||||||||||||| ||||
Sbjct: 1 gttgttgacagaagatagagagcac 25
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 89 tcctttgtgctctctagacttctgtcatcacc 120
||||||||||||| || ||||||||||||||
Sbjct: 70 tcctttgtgctctttatgcttctgtcatcacc 101
>46862_aqc-miR156b:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 89 tcctttgtgctctctagacttctgtcatc 117
|||||||||||||||| |||||||||||
Sbjct: 55 tcctttgtgctctctatgcttctgtcatc 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 7 tgacagaagatagagggcactaaggatgatatgcat 42
||||||||||||||| |||| | ||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatgatatgcat 36
>48696_mtr-miR156f:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttgttgacagaagatagagggcac 26
||||||||||||||||||| ||||
Sbjct: 3 ttgttgacagaagatagagagcac 26
