miRNEST 2.0, an integrative microRNA resource :: BLAST
>48703_mtr-miR160d:pmrd
Length = 91
Score = 69.9 bits (35), Expect = 4e-13
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 20 gtgcctggctccctgtatgccatttgtagagttcatcaagatgttgatgactttaatgaa 79
|||||||||||||||||||||||||||||||| ||||| || |||||| ||| ||||
Sbjct: 5 gtgcctggctccctgtatgccatttgtagagtccatcacgacagtgatgaacttagtgaa 64
Query: 80 tggcgtgcgaggagccatgcatg 102
|||||| | |||| ||||||||
Sbjct: 65 tggcgtactcggagtcatgcatg 87
>48542_gma-miR160a:pmrd
Length = 119
Score = 65.9 bits (33), Expect = 6e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 20 gtgcctggctccctgtatgccatttgtagagttcatc 56
||||||||||||||||||||||||||||||| |||||
Sbjct: 20 gtgcctggctccctgtatgccatttgtagagctcatc 56
>51610_ptc-miR160c:pmrd
Length = 98
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 20 gtgcctggctccctgtatgccatttgtagag 50
|||||||||||||||||||||||||| ||||
Sbjct: 10 gtgcctggctccctgtatgccatttgcagag 40
>51609_ptc-miR160b:pmrd
Length = 98
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 20 gtgcctggctccctgtatgccatttgtagag 50
|||||||||||||||||||||||||| ||||
Sbjct: 10 gtgcctggctccctgtatgccatttgcagag 40
>54783_vvi-miR160f:pmrd
Length = 102
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgccatttgtagag 50
||||||||||||||||||||||||| ||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagag 40
>54938_zma-miR160a:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tgcgtgcctggctccctgtatgcca 41
|||||||||||||||||||||||||
Sbjct: 6 tgcgtgcctggctccctgtatgcca 30
>54781_vvi-miR160d:pmrd
Length = 102
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgccatttg 45
|||||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttg 35
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 atggcgtgcgaggagccatgcatg 102
||||||||||||||||||||||||
Sbjct: 69 atggcgtgcgaggagccatgcatg 92
>54541_sly-miR160a:pmrd
Length = 129
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgccatttg 45
|||||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccatttg 44
>46865_aqc-miR160b:pmrd
Length = 82
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgccatttg 45
|||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttg 25
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 atggcgtgcgaggagccatgcat 101
|||||||||||||||||||||||
Sbjct: 59 atggcgtgcgaggagccatgcat 81
>48827_osa-miR160b:pmrd
Length = 139
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 gcgtgcctggctccctgtatgcca 41
||||||||||||||||||||||||
Sbjct: 27 gcgtgcctggctccctgtatgcca 50
>48704_mtr-miR160e:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 gtgcctggctccctgtatgccat 42
|||||||||||||||||||||||
Sbjct: 5 gtgcctggctccctgtatgccat 27
>48702_mtr-miR160b:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 gtgcctggctccctgtatgccat 42
|||||||||||||||||||||||
Sbjct: 5 gtgcctggctccctgtatgccat 27
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 cgtgcctggctccctgtatgcca 41
|||||||||||||||||||||||
Sbjct: 3 cgtgcctggctccctgtatgcca 25
>46935_ath-miR160b:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 cgtgcctggctccctgtatgcca 41
|||||||||||||||||||||||
Sbjct: 3 cgtgcctggctccctgtatgcca 25
>54940_zma-miR160c:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 gtgcctggctccctgtatgcca 41
||||||||||||||||||||||
Sbjct: 6 gtgcctggctccctgtatgcca 27
>54939_zma-miR160b:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 gtgcctggctccctgtatgcca 41
||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgcca 41
>54780_vvi-miR160c:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 gtgcctggctccctgtatgcca 41
||||||||||||||||||||||
Sbjct: 10 gtgcctggctccctgtatgcca 31
>54574_smo-miR160a:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgccat 42
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>51615_ptc-miR160h:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 gtgcctggctccctgtatgccatttg 45
||||||||||||||| ||||||||||
Sbjct: 10 gtgcctggctccctgcatgccatttg 35
>48828_osa-miR160c:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 gtgcctggctccctgtatgcca 41
||||||||||||||||||||||
Sbjct: 6 gtgcctggctccctgtatgcca 27
>48826_osa-miR160a:pmrd
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 gtgcctggctccctgtatgcca 41
||||||||||||||||||||||
Sbjct: 3 gtgcctggctccctgtatgcca 24
>48791_oba-miR160:pmrd
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 gtgcctggctccctgtatgcca 41
||||||||||||||||||||||
Sbjct: 3 gtgcctggctccctgtatgcca 24
>48397_bra-miR160a:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgccat 42
||||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgccat 47
>48396_bra-miR160a:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgccat 42
||||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgccat 47
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgccat 42
||||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgccat 25
>46934_ath-miR160a:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgccat 42
||||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgccat 25
>54947_zma-miR160m:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54946_zma-miR160i:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgcca 22
>54945_zma-miR160h:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54944_zma-miR160g:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54942_zma-miR160e:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>54941_zma-miR160d:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>54759_ttu-miR160a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54675_tae-miR160:pmrd
Length = 148
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgcca 42
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 79 atggcgtgcgaggagccatgcatg 102
|||||||||||||||||| |||||
Sbjct: 90 atggcgtgcgaggagccaagcatg 113
>54575_smo-miR160b:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>54408_sbi-miR160e:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54407_sbi-miR160d:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54406_sbi-miR160c:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54405_sbi-miR160b:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54404_sbi-miR160a:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 12 tgcctggctccctgtatgcca 32
>51611_ptc-miR160d:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51608_ptc-miR160a:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51364_ppt-miR160f:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>51363_ppt-miR160e:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>51359_ppt-miR160a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51334_pga-miR160:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48833_osa-miR160n:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48832_osa-miR160m:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48829_osa-miR160d:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgcca 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 79 atggcgtgcgaggagccatgcatg 102
|||||||||||||||||| |||||
Sbjct: 116 atggcgtgcgaggagccaagcatg 139
>48658_hvv-miR160a:pmrd
Length = 344
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 324 tgcctggctccctgtatgcca 344
>46936_ath-miR160c:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcca 41
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>54943_zma-miR160f:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcc 40
||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcc 40
>54760_ttu-miR160b:pmrd
Length = 218
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcc 40
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>54528_sce-miR160:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcc 40
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>51367_ppt-miR160i:pmrd
Length = 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 gcctggctccctgtatgcca 41
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>51360_ppt-miR160b:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 gcctggctccctgtatgcca 41
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>48830_osa-miR160e:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcc 40
||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcc 30
>48659_hvv-miR160b:pmrd
Length = 47
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcc 40
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48635_gra-miR160b:pmrd
Length = 293
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcc 40
||||||||||||||||||||
Sbjct: 273 tgcctggctccctgtatgcc 292
>48634_gra-miR160a:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcc 40
||||||||||||||||||||
Sbjct: 86 tgcctggctccctgtatgcc 105
>48544_gma-miR160o:pmrd
Length = 503
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcc 40
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48543_gma-miR160n:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcc 40
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48306_bdi-miR160:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgtatgcc 40
||||||||||||||||||||
Sbjct: 18 tgcctggctccctgtatgcc 37
