miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48715_mtr-miR167:pmrd
Length = 320
Score = 438 bits (221), Expect = e-123
Identities = 287/320 (89%)
Strand = Plus / Plus
Query: 1 aaaagtgaagctgccagcatgatctaggtttggttatacaatagtagtattgagaaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaagtgaagctgccagcatgatctaggtttggttatacaatagtagtattgagaaggaa 60
Query: 61 ctatatacgnnnnnnnnnnactataccacnnnnnnngattactctctttcacaaaatagg 120
||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 61 ctatatacgttttttttttactataccacaaaaaaagattactctctttcacaaaatagg 120
Query: 121 tattaaagtgccatgatttttgcattactaatgggaaaataaattttggacaccgaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattaaagtgccatgatttttgcattactaatgggaaaataaattttggacaccgaattt 180
Query: 181 ctcacnnnnnnnnnatatagataggaaataggttttggtggtannnnnnngtggtacagt 240
||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 181 ctcactttttttttatatagataggaaataggttttggtggtatttttttgtggtacagt 240
Query: 241 aaaaaatagccgctatatccatacaagtagtactgctagcataaccctgactaggtcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaaaatagccgctatatccatacaagtagtactgctagcataaccctgactaggtcatg 300
Query: 301 ctgtgctagcctcactcctt 320
||||||||||||||||||||
Sbjct: 301 ctgtgctagcctcactcctt 320
>48557_gma-miR167d:pmrd
Length = 121
Score = 69.9 bits (35), Expect = 1e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 282 taaccctgactaggtcatgctgtgctagcctcactcctt 320
||||||| |||||||||||||||||||||||||||||||
Sbjct: 70 taaccctcactaggtcatgctgtgctagcctcactcctt 108
Score = 63.9 bits (32), Expect = 7e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 aaaagtgaagctgccagcatgatctaggtttggtta 36
||||||||||||||||||||||||||| ||||||||
Sbjct: 16 aaaagtgaagctgccagcatgatctagctttggtta 51
>48555_gma-miR167b:pmrd
Length = 121
Score = 69.9 bits (35), Expect = 1e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 282 taaccctgactaggtcatgctgtgctagcctcactcctt 320
||||||| |||||||||||||||||||||||||||||||
Sbjct: 70 taaccctcactaggtcatgctgtgctagcctcactcctt 108
Score = 63.9 bits (32), Expect = 7e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 aaaagtgaagctgccagcatgatctaggtttggtta 36
||||||||||||||||||||||||||| ||||||||
Sbjct: 16 aaaagtgaagctgccagcatgatctagctttggtta 51
>48554_gma-miR167a:pmrd
Length = 119
Score = 61.9 bits (31), Expect = 3e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 282 taaccctgactaggtcatgctgtgctagcctcactcctt 320
|||||||||||||||||||||||| |||||||||||||
Sbjct: 68 taaccctgactaggtcatgctgtgacagcctcactcctt 106
Score = 56.0 bits (28), Expect = 2e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 aaaagtgaagctgccagcatgatctaggtttggtta 36
|||||||||||||||||||||||||| ||||||||
Sbjct: 16 aaaagtgaagctgccagcatgatctacctttggtta 51
>54435_sbi-miR167i:pmrd
Length = 132
Score = 56.0 bits (28), Expect = 2e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 4 agtgaagctgccagcatgatctaggtttggtt 35
|||||||||||||||||||||||| |||||||
Sbjct: 1 agtgaagctgccagcatgatctagctttggtt 32
>51643_ptc-miR167b:pmrd
Length = 96
Score = 56.0 bits (28), Expect = 2e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 aaaagtgaagctgccagcatgatctaggtttggtta 36
|||||||||||||||||||||||||| ||||||||
Sbjct: 6 aaaagtgaagctgccagcatgatctatctttggtta 41
Score = 46.1 bits (23), Expect = 2e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 282 taaccctgactaggtcatgctgtgctagcctcactcctt 320
||||||| ||||||||||||||| |||||||||||||
Sbjct: 56 taaccctagctaggtcatgctgtgacagcctcactcctt 94
>54800_vvi-miR167d:pmrd
Length = 115
Score = 54.0 bits (27), Expect = 7e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 3 aagtgaagctgccagcatgatctaggtttgg 33
||||||||||||||||||||||||| |||||
Sbjct: 8 aagtgaagctgccagcatgatctagctttgg 38
>46953_ath-miR167b:pmrd
Length = 109
Score = 52.0 bits (26), Expect = 3e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 aagtgaagctgccagcatgatctaggtttggtta 36
|||||||||||||||||||||||| ||||||||
Sbjct: 7 aagtgaagctgccagcatgatctatctttggtta 40
>54996_zma-miR167s:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 agtgaagctgccagcatgatctag 27
||||||||||||||||||||||||
Sbjct: 2 agtgaagctgccagcatgatctag 25
>54994_zma-miR167q:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 agtgaagctgccagcatgatctag 27
||||||||||||||||||||||||
Sbjct: 2 agtgaagctgccagcatgatctag 25
>54993_zma-miR167p:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 agtgaagctgccagcatgatctag 27
||||||||||||||||||||||||
Sbjct: 2 agtgaagctgccagcatgatctag 25
>54992_zma-miR167o:pmrd
Length = 160
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 agtgaagctgccagcatgatctag 27
||||||||||||||||||||||||
Sbjct: 2 agtgaagctgccagcatgatctag 25
>54991_zma-miR167n:pmrd
Length = 221
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 agtgaagctgccagcatgatctag 27
||||||||||||||||||||||||
Sbjct: 195 agtgaagctgccagcatgatctag 218
>54981_zma-miR167d:pmrd
Length = 133
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 agtgaagctgccagcatgatctag 27
||||||||||||||||||||||||
Sbjct: 15 agtgaagctgccagcatgatctag 38
>54980_zma-miR167c:pmrd
Length = 132
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 agtgaagctgccagcatgatctag 27
||||||||||||||||||||||||
Sbjct: 15 agtgaagctgccagcatgatctag 38
>54978_zma-miR167a:pmrd
Length = 190
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 agtgaagctgccagcatgatctag 27
||||||||||||||||||||||||
Sbjct: 15 agtgaagctgccagcatgatctag 38
>54678_tae-miR167:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 agtgaagctgccagcatgatctag 27
||||||||||||||||||||||||
Sbjct: 16 agtgaagctgccagcatgatctag 39
>51645_ptc-miR167d:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 4e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatctaggtttggtta 36
|||||||||||||||||||||| ||||||||
Sbjct: 10 gtgaagctgccagcatgatctatctttggtta 41
>51349_ppl-miR167a:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 4e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatctaggtttggtta 36
|||||||||||||||||||||| ||||||||
Sbjct: 10 gtgaagctgccagcatgatctatctttggtta 41
>48861_osa-miR167c:pmrd
Length = 163
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 agtgaagctgccagcatgatctag 27
||||||||||||||||||||||||
Sbjct: 15 agtgaagctgccagcatgatctag 38
>48859_osa-miR167a:pmrd
Length = 141
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 agtgaagctgccagcatgatctag 27
||||||||||||||||||||||||
Sbjct: 12 agtgaagctgccagcatgatctag 35
>48858_osa-miR167a:pmrd
Length = 141
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 agtgaagctgccagcatgatctag 27
||||||||||||||||||||||||
Sbjct: 12 agtgaagctgccagcatgatctag 35
>54997_zma-miR167t:pmrd
Length = 92
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatcta 26
||||||||||||||||||||||
Sbjct: 1 gtgaagctgccagcatgatcta 22
>54995_zma-miR167r:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatcta 26
||||||||||||||||||||||
Sbjct: 6 gtgaagctgccagcatgatcta 27
>54979_zma-miR167b:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatcta 26
||||||||||||||||||||||
Sbjct: 18 gtgaagctgccagcatgatcta 39
>54427_sbi-miR167a:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatctag 27
||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctag 22
>48860_osa-miR167b:pmrd
Length = 163
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatcta 26
||||||||||||||||||||||
Sbjct: 17 gtgaagctgccagcatgatcta 38
>48399_bra-miR167a:pmrd
Length = 134
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatctag 27
||||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatctag 39
>48348_bna-miR167c:pmrd
Length = 134
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatctag 27
||||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatctag 39
>48308_bdi-miR167:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatcta 26
||||||||||||||||||||||
Sbjct: 10 gtgaagctgccagcatgatcta 31
>54984_zma-miR167g:pmrd
Length = 243
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatct 25
|||||||||||||||||||||
Sbjct: 20 gtgaagctgccagcatgatct 40
>54801_vvi-miR167e:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatcta 26
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatcta 31
>54798_vvi-miR167b:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatcta 26
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatcta 31
>54635_sof-miR167b:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatct 25
|||||||||||||||||||||
Sbjct: 20 gtgaagctgccagcatgatct 40
>54634_sof-miR167a:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatct 25
|||||||||||||||||||||
Sbjct: 20 gtgaagctgccagcatgatct 40
>54545_sly-miR167:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatcta 26
|||||||||||||||||||||
Sbjct: 19 tgaagctgccagcatgatcta 39
>54431_sbi-miR167e:pmrd
Length = 179
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatct 25
|||||||||||||||||||||
Sbjct: 20 gtgaagctgccagcatgatct 40
>54428_sbi-miR167b:pmrd
Length = 198
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatcta 26
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatcta 21
>51644_ptc-miR167c:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatcta 26
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatcta 31
>51642_ptc-miR167a:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatcta 26
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatcta 31
>49693_osa-miRf10478-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 5 gtgaagctgccagcatgatct 25
|||||||||||||||||||||
Sbjct: 81 gtgaagctgccagcatgatct 61
>49692_osa-miRf10477-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatct 25
|||||||||||||||||||||
Sbjct: 17 gtgaagctgccagcatgatct 37
>48866_osa-miR167h:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatct 25
|||||||||||||||||||||
Sbjct: 10 gtgaagctgccagcatgatct 30
>48865_osa-miR167g:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 gtgaagctgccagcatgatct 25
|||||||||||||||||||||
Sbjct: 10 gtgaagctgccagcatgatct 30
>48402_bra-miR167d:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatcta 26
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>48401_bra-miR167c:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatcta 26
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>48400_bra-miR167b:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatcta 26
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>48347_bna-miR167b:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatcta 26
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>48346_bna-miR167a:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatcta 26
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>46952_ath-miR167a:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgaagctgccagcatgatcta 26
|||||||||||||||||||||
Sbjct: 19 tgaagctgccagcatgatcta 39
