miRNEST 2.0, an integrative microRNA resource :: BLAST
>52331_ptc-miRf10509-akr:pmrd
Length = 99
Score = 133 bits (67), Expect = 2e-32
Identities = 90/95 (94%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 1 aaagcgatgttggtgaggttcaatccgaagacggatttacatgt-atag-agttgtaaaa 58
||||||||||||||||||||||||||||||||||||||||| || | || | ||||||||
Sbjct: 3 aaagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaa 62
Query: 59 tacgatctcagattgagccgcgccaatatcacttt 93
|||||||||||||||||||||||||||||||||||
Sbjct: 63 tacgatctcagattgagccgcgccaatatcacttt 97
>51686_ptc-miR171c:pmrd
Length = 104
Score = 133 bits (67), Expect = 2e-32
Identities = 90/95 (94%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 1 aaagcgatgttggtgaggttcaatccgaagacggatttacatgt-atag-agttgtaaaa 58
||||||||||||||||||||||||||||||||||||||||| || | || | ||||||||
Sbjct: 6 aaagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaa 65
Query: 59 tacgatctcagattgagccgcgccaatatcacttt 93
|||||||||||||||||||||||||||||||||||
Sbjct: 66 tacgatctcagattgagccgcgccaatatcacttt 100
>48497_ghr-miR171:pmrd
Length = 85
Score = 107 bits (54), Expect = 1e-24
Identities = 78/85 (91%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 6 gatgttggtgaggttcaatccgaagacggatttac--atgtatagagttgtaaaatacga 63
||||||||||||||||||||||||||||||||||| || || ||| |||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
Query: 64 tctcagattgagccgcgccaatatc 88
|||||||||||||||||||||||||
Sbjct: 61 tctcagattgagccgcgccaatatc 85
>52488_ptc-miRf10666-akr:pmrd
Length = 93
Score = 99.6 bits (50), Expect = 3e-22
Identities = 83/93 (89%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1 aaagcgatgttggtgaggttcaatccgaagacggatttacatgtatagagttgtaaaata 60
|||||||||||||||||||||||||||||||| |||||||| | | | |||||||
Sbjct: 2 aaagcgatgttggtgaggttcaatccgaagacagatttacacgagtgaa--agtaaaatc 59
Query: 61 cgatctcagattgagccgcgccaatatcacttt 93
|||||||||||||||||||||||||||||||||
Sbjct: 60 cgatctcagattgagccgcgccaatatcacttt 92
>51687_ptc-miR171d:pmrd
Length = 100
Score = 99.6 bits (50), Expect = 3e-22
Identities = 83/93 (89%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1 aaagcgatgttggtgaggttcaatccgaagacggatttacatgtatagagttgtaaaata 60
|||||||||||||||||||||||||||||||| |||||||| | | | |||||||
Sbjct: 6 aaagcgatgttggtgaggttcaatccgaagacagatttacacgagtgaa--agtaaaatc 63
Query: 61 cgatctcagattgagccgcgccaatatcacttt 93
|||||||||||||||||||||||||||||||||
Sbjct: 64 cgatctcagattgagccgcgccaatatcacttt 96
>54832_vvi-miR171e:pmrd
Length = 103
Score = 93.7 bits (47), Expect = 2e-20
Identities = 81/92 (88%), Gaps = 4/92 (4%)
Strand = Plus / Plus
Query: 2 aagcgatgttggtgaggttcaatccgaagacggatttacatgtatagagttgtaaaatac 61
||||||||||||||||||||||||||||||||||||||| |||| ||||| ||
Sbjct: 8 aagcgatgttggtgaggttcaatccgaagacggatttac----gaagagccgtaaagaac 63
Query: 62 gatctcagattgagccgcgccaatatcacttt 93
|||||| |||||||||||||||||||||||||
Sbjct: 64 gatctctgattgagccgcgccaatatcacttt 95
>54554_sly-miR171d:pmrd
Length = 112
Score = 87.7 bits (44), Expect = 1e-18
Identities = 80/91 (87%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 2 aagcgatgttggtgaggttcaatccgaagacggatttacatgtatagagttgtaaaatac 61
|||||||||||||||||||||||||||||||| |||| ||| || | ||||| ||
Sbjct: 8 aagcgatgttggtgaggttcaatccgaagacgaattt--atgcttattttcgtaaagaac 65
Query: 62 gatctcagattgagccgcgccaatatcactt 92
|||||||||||||||||||||||||||||||
Sbjct: 66 gatctcagattgagccgcgccaatatcactt 96
>54833_vvi-miR171f:pmrd
Length = 103
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 62 gatctcagattgagccgcgccaatatcacttt 93
||||||||||||||||||||||||||||||||
Sbjct: 64 gatctcagattgagccgcgccaatatcacttt 95
>51383_ppt-miR171b:pmrd
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 65 ctcagattgagccgcgccaatatcac 90
||||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatcac 86
>51382_ppt-miR171a:pmrd
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 66 tcagattgagccgcgccaatatcac 90
|||||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatcac 85
>54461_sbi-miR171j:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatcactt 92
||||||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatcactt 107
>54582_smo-miR171d:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 64 tctcagattgagccgcgccaatatcac 90
||||| |||||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatatcac 91
>54553_sly-miR171c:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatcac 90
||||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatcac 100
>48895_osa-miR171a:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 agcgatgttggtgaggttcaatccga 28
|||||| |||||||||||||||||||
Sbjct: 7 agcgatattggtgaggttcaatccga 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
>54667_stu-miR171:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatca 89
|||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatca 22
>54666_stu-miR170:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatca 89
|||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatca 22
>55028_zma-miR171a:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>55027_zma-miR170p:pmrd
Length = 62
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 43 gattgagccgcgccaatatc 62
>54910_zel-miR171:pmrd
Length = 65
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>54579_smo-miR171a:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 68 agattgagccgcgccaatatcact 91
||||||||||| ||||||||||||
Sbjct: 102 agattgagccgtgccaatatcact 125
>54458_sbi-miR171g:pmrd
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>54451_sbi-miR170:pmrd
Length = 55
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 36 gattgagccgcgccaatatc 55
>51694_ptc-miR171k:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>51342_ppd-miR170:pmrd
Length = 297
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 278 gattgagccgcgccaatatc 297
>48636_gra-miR171:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>48569_gma-miR171m:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 153 gattgagccgcgccaatatc 172
>48484_gcl-miR171:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 186 gattgagccgcgccaatatc 205
>48407_bra-miR171e:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>48369_bna-miR171g:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatc 98
>48368_bna-miR171f:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>48313_bdi-miR171d:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 82 gattgagccgcgccaatatc 101
>48311_bdi-miR171a:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>46982_ath-miR171o:pmrd
Length = 339
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 320 gattgagccgcgccaatatc 339
>46981_ath-miR171n:pmrd
Length = 461
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>46980_ath-miR171m:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 73 gattgagccgcgccaatatc 92
>46977_ath-miR171a:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>46976_ath-miR170n:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 153 gattgagccgcgccaatatc 172
>46975_ath-miR170m:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 73 gattgagccgcgccaatatc 92
>46853_ace-miR171c:pmrd
Length = 216
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 197 gattgagccgcgccaatatc 216
>46852_ace-miR171b:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 196 gattgagccgcgccaatatc 215
>46851_ace-miR171a:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>46850_ace-miR170d:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 196 gattgagccgcgccaatatc 215
>46849_ace-miR170c:pmrd
Length = 55
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>46848_ace-miR170b:pmrd
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 57 gattgagccgcgccaatatc 76
>46847_ace-miR170a:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gattgagccgcgccaatatc 88
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
