miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48765_mtr-miR1509:pmrd
Length = 254
Score = 462 bits (233), Expect = e-131
Identities = 247/254 (97%)
Strand = Plus / Plus
Query: 1 cccggcctctctcttgcctcatagctagttagggttttcgttgctgtctcgtgttttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccggcctctctcttgcctcatagctagttagggttttcgttgctgtctcgtgttttctt 60
Query: 61 ttgatccattcaannnnnnnaatctaggaaaatacggtggagagggtttttctttttatt 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgatccattcaatttttttaatctaggaaaatacggtggagagggtttttctttttatt 120
Query: 121 gtttgagattgatatctctcgtcttctctaccggatttccttgattaaagaaatttactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtttgagattgatatctctcgtcttctctaccggatttccttgattaaagaaatttactg 180
Query: 181 gttcattattattttttagctatgatgacaatgtgtatcccagctcattatgaggccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttcattattattttttagctatgatgacaatgtgtatcccagctcattatgaggccttt 240
Query: 241 ttgtaaggtctggg 254
||||||||||||||
Sbjct: 241 ttgtaaggtctggg 254
>48764_mtr-miR1509:pmrd
Length = 254
Score = 462 bits (233), Expect = e-131
Identities = 247/254 (97%)
Strand = Plus / Plus
Query: 1 cccggcctctctcttgcctcatagctagttagggttttcgttgctgtctcgtgttttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccggcctctctcttgcctcatagctagttagggttttcgttgctgtctcgtgttttctt 60
Query: 61 ttgatccattcaannnnnnnaatctaggaaaatacggtggagagggtttttctttttatt 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgatccattcaatttttttaatctaggaaaatacggtggagagggtttttctttttatt 120
Query: 121 gtttgagattgatatctctcgtcttctctaccggatttccttgattaaagaaatttactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtttgagattgatatctctcgtcttctctaccggatttccttgattaaagaaatttactg 180
Query: 181 gttcattattattttttagctatgatgacaatgtgtatcccagctcattatgaggccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttcattattattttttagctatgatgacaatgtgtatcccagctcattatgaggccttt 240
Query: 241 ttgtaaggtctggg 254
||||||||||||||
Sbjct: 241 ttgtaaggtctggg 254
