miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48769_mtr-miR1510b:pmrd
Length = 236
Score = 468 bits (236), Expect = e-133
Identities = 236/236 (100%)
Strand = Plus / Plus
Query: 1 acatctagttagtcataccgataggcgagagagatttgctactgcaattgttgttttacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acatctagttagtcataccgataggcgagagagatttgctactgcaattgttgttttacc 60
Query: 61 cgctcctcccatcccatggatccctaccatgtggactccatcatcatcagatccaatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctcctcccatcccatggatccctaccatgtggactccatcatcatcagatccaatctt 120
Query: 121 gtgataatagagtcacatggtcggtatccctggaatggaggatcaggtaaaacaactttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgataatagagtcacatggtcggtatccctggaatggaggatcaggtaaaacaactttt 180
Query: 181 gctttagaaatgattcatttctcatcaccttcatcaggtttatgatttctgtctgt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctttagaaatgattcatttctcatcaccttcatcaggtttatgatttctgtctgt 236
>48768_mtr-miR1510b:pmrd
Length = 236
Score = 468 bits (236), Expect = e-133
Identities = 236/236 (100%)
Strand = Plus / Plus
Query: 1 acatctagttagtcataccgataggcgagagagatttgctactgcaattgttgttttacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acatctagttagtcataccgataggcgagagagatttgctactgcaattgttgttttacc 60
Query: 61 cgctcctcccatcccatggatccctaccatgtggactccatcatcatcagatccaatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctcctcccatcccatggatccctaccatgtggactccatcatcatcagatccaatctt 120
Query: 121 gtgataatagagtcacatggtcggtatccctggaatggaggatcaggtaaaacaactttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgataatagagtcacatggtcggtatccctggaatggaggatcaggtaaaacaactttt 180
Query: 181 gctttagaaatgattcatttctcatcaccttcatcaggtttatgatttctgtctgt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctttagaaatgattcatttctcatcaccttcatcaggtttatgatttctgtctgt 236
>48767_mtr-miR1510a:pmrd
Length = 164
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 36 ttgctactgcaattgttgttttacccgctcctcccatcccat 77
|||||| |||||||||||| |||||| ||||||||||||||
Sbjct: 5 ttgctattgcaattgttgtcttacccattcctcccatcccat 46
>48766_mtr-miR1510a:pmrd
Length = 164
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 36 ttgctactgcaattgttgttttacccgctcctcccatcccat 77
|||||| |||||||||||| |||||| ||||||||||||||
Sbjct: 5 ttgctattgcaattgttgtcttacccattcctcccatcccat 46
