miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48775_mtr-miR2088:pmrd
Length = 146
Score = 228 bits (115), Expect = 7e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 1 gtagacggcggcttaaccgatgtaggcctagattacattggacaaaacagtccaaacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 gtagacggcggcttaaccgatgtaggcctagattacattggacaaaacagtccaaacttg 75
Query: 61 agatggttacttcttggtccaatgtaatctaggtctacatctgttaagtctctaa 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 agatggttacttcttggtccaatgtaatctaggtctacatctgttaagtctctaa 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 77 gtccaatgtaatctaggtctacatctgttaag 108
||||||||||||||||| ||||||| ||||||
Sbjct: 58 gtccaatgtaatctaggcctacatcggttaag 27
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 12 cttaaccgatgtaggcctagattacattggac 43
|||||| ||||||| |||||||||||||||||
Sbjct: 123 cttaacagatgtagacctagattacattggac 92
>48774_mtr-miR2088:pmrd
Length = 146
Score = 228 bits (115), Expect = 7e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 1 gtagacggcggcttaaccgatgtaggcctagattacattggacaaaacagtccaaacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 gtagacggcggcttaaccgatgtaggcctagattacattggacaaaacagtccaaacttg 75
Query: 61 agatggttacttcttggtccaatgtaatctaggtctacatctgttaagtctctaa 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 agatggttacttcttggtccaatgtaatctaggtctacatctgttaagtctctaa 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 77 gtccaatgtaatctaggtctacatctgttaag 108
||||||||||||||||| ||||||| ||||||
Sbjct: 58 gtccaatgtaatctaggcctacatcggttaag 27
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 12 cttaaccgatgtaggcctagattacattggac 43
|||||| ||||||| |||||||||||||||||
Sbjct: 123 cttaacagatgtagacctagattacattggac 92
