miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>48778_mtr-miR2118:pmrd
          Length = 92

 Score = 97.6 bits (49), Expect = 2e-21
 Identities = 49/49 (100%)
 Strand = Plus / Plus

                                                           
Query: 26 gagcttgaggaagttatgggatatgggaggatcggtaaaacagatctaa 74
          |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gagcttgaggaagttatgggatatgggaggatcggtaaaacagatctaa 49





>54765_vun-miR2118:pmrd
          Length = 129

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 101 ccgattccacccattcctattatttcctt 129
           |||||||||||||||||||| ||||||||
Sbjct: 101 ccgattccacccattcctatgatttcctt 129





>54385_pvu-miR2118:pmrd
          Length = 95

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 101 ccgattccacccattcctattatttcctt 129
           |||||||||||||||||||| ||||||||
Sbjct: 67  ccgattccacccattcctatgatttcctt 95





>48628_gma-miR2118:pmrd
          Length = 129

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 101 ccgattccacccattcctattatttcctt 129
           |||||||||||||||||||| ||||||||
Sbjct: 101 ccgattccacccattcctatgatttcctt 129