miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54383_pvu-miR482:pmrd
Length = 133
Score = 264 bits (133), Expect = 1e-71
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 1 gggatccggagattggagcaatcagaatttgtgggaatgggctgattgggaagcaatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggatccggagattggagcaatcagaatttgtgggaatgggctgattgggaagcaatgtg 60
Query: 61 tgctggtgcaatgcatttaatttcttcccaattccgcccattcctatgatctctgatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctggtgcaatgcatttaatttcttcccaattccgcccattcctatgatctctgatgat 120
Query: 121 tctttcctttcct 133
|||||||||||||
Sbjct: 121 tctttcctttcct 133
>54382_pvu-miR482:pmrd
Length = 133
Score = 264 bits (133), Expect = 1e-71
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 1 gggatccggagattggagcaatcagaatttgtgggaatgggctgattgggaagcaatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggatccggagattggagcaatcagaatttgtgggaatgggctgattgggaagcaatgtg 60
Query: 61 tgctggtgcaatgcatttaatttcttcccaattccgcccattcctatgatctctgatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctggtgcaatgcatttaatttcttcccaattccgcccattcctatgatctctgatgat 120
Query: 121 tctttcctttcct 133
|||||||||||||
Sbjct: 121 tctttcctttcct 133
>48585_gma-miR482:pmrd
Length = 95
Score = 180 bits (91), Expect = 2e-46
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 22 tcagaatttgtgggaatgggctgattgggaagcaatgtgtgctggtgcaatgcatttaat 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcagaatttgtgggaatgggctgattgggaagcaatgtgtgctggtgcaatgcatttaat 60
Query: 82 ttcttcccaattccgcccattcctatgatctctga 116
||||||||||||||||||||||||||||| |||||
Sbjct: 61 ttcttcccaattccgcccattcctatgatttctga 95
>48692_mdo-miR482:pmrd
Length = 152
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 tttcttcccaattccgcccattcctatgat 110
||||||||||| |||||||||||||||||
Sbjct: 93 tttcttcccaagcccgcccattcctatgat 122
>48691_mdo-miR482:pmrd
Length = 152
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 tttcttcccaattccgcccattcctatgat 110
||||||||||| |||||||||||||||||
Sbjct: 93 tttcttcccaagcccgcccattcctatgat 122
