miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54384_pvu-miR1514a:pmrd
Length = 202
Score = 400 bits (202), Expect = e-112
Identities = 202/202 (100%)
Strand = Plus / Plus
Query: 1 attgaagaacgccttgcctaccttctcactgcatccttttgaatggaaacagggctttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgaagaacgccttgcctaccttctcactgcatccttttgaatggaaacagggctttcc 60
Query: 61 tgttttcattttgaaaataggcattgcattacatttcgatgcgtcttccaattccaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttttcattttgaaaataggcattgcattacatttcgatgcgtcttccaattccaatgc 120
Query: 121 ctattttaagatgaaaacaaggatacactgtttttgtttgaaactgttgtgaaggaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctattttaagatgaaaacaaggatacactgtttttgtttgaaactgttgtgaaggaagat 180
Query: 181 aagactcccgagttcttcaatt 202
||||||||||||||||||||||
Sbjct: 181 aagactcccgagttcttcaatt 202
>48597_gma-miR1514a:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 114 ccaatgcctattttaagatgaaaacaaggata 145
|||||||||||||||| |||||||||| ||||
Sbjct: 68 ccaatgcctattttaaaatgaaaacaacgata 99
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 ttttcattttgaaaataggcattg 86
|||||||||| |||||||||||||
Sbjct: 9 ttttcatttttaaaataggcattg 32
>48598_gma-miR1514b:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 116 aatgcctattttaagatgaaaacaaggata 145
|||||||||||||| |||||||||| ||||
Sbjct: 80 aatgcctattttaaaatgaaaacaatgata 109
