miRNEST 2.0, an integrative microRNA resource :: BLAST
>54830_vvi-miR171c:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 118 ttttgattgagccgtgccaatatc 141
||||||||||||||||||||||||
Sbjct: 67 ttttgattgagccgtgccaatatc 90
>51689_ptc-miR171f:pmrd
Length = 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatcctagtgc 148
||||||||||||||||||||| ||||||
Sbjct: 101 tgattgagccgtgccaatatcttagtgc 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 20 cgatgttggctcggttcactcagacaaaa 48
|||||||||| ||||||||||||| ||||
Sbjct: 10 cgatgttggcccggttcactcagagaaaa 38
>48899_osa-miR171e:pmrd
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatcctagtgc 148
||||||||||||||||||||| ||||||
Sbjct: 89 tgattgagccgtgccaatatcttagtgc 116
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 gatgttggctcggttcactcagac 44
||||||||||||| ||||||||||
Sbjct: 11 gatgttggctcggctcactcagac 34
>48896_osa-miR171b:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 118 ttttgattgagccgtgccaatatc 141
||||||||||||||||||||||||
Sbjct: 67 ttttgattgagccgtgccaatatc 90
>46879_aqc-miR171d:pmrd
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 118 ttttgattgagccgtgccaatatc 141
||||||||||||||||||||||||
Sbjct: 81 ttttgattgagccgtgccaatatc 104
>55029_zma-miR171b:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>54831_vvi-miR171d:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatc 87
>54551_sly-miR171a:pmrd
Length = 122
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatc 107
>54462_sbi-miR171k:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>54452_sbi-miR171a:pmrd
Length = 161
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 120 tttgattgagccgtgccaatatc 142
>51882_ptc-miRf10060-akr:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatc 83
>51692_ptc-miR171i:pmrd
Length = 129
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
>51685_ptc-miR171b:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 69 tttgattgagccgtgccaatatc 91
>51684_ptc-miR171a:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatc 92
>51346_ppe-miR171:pmrd
Length = 97
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatc 87
>51345_ppe-miR170:pmrd
Length = 97
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatc 87
>48897_osa-miR171c:pmrd
Length = 99
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatc 89
>48723_mtr-miR171g:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>48722_mtr-miR171d:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>48403_bra-miR171a:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>48386_bol-miR171a:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatc 88
>48367_bna-miR171e:pmrd
Length = 92
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatc 87
>48366_bna-miR171d:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatc 88
>48312_bdi-miR171c:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatc 84
>46979_ath-miR171c:pmrd
Length = 116
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatc 107
>46880_aqc-miR171e:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 23 tttgattgagccgtgccaatatc 1
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 21 gatgttggctcggttcactcagac 44
||||||||||||||||| ||||||
Sbjct: 100 gatgttggctcggttcattcagac 77
>46876_aqc-miR171a:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tttgattgagccgtgccaatatc 141
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 gatgttggctcggttcactcagac 44
||||||||||||||||| ||||||
Sbjct: 1 gatgttggctcggttcattcagac 24
>55039_zma-miR171m:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 ttgattgagccgtgccaatatc 141
||||||||||||||||||||||
Sbjct: 92 ttgattgagccgtgccaatatc 113
>55036_zma-miR171i:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 ttgattgagccgtgccaatatc 141
||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatc 85
>55033_zma-miR171f:pmrd
Length = 155
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 ttgattgagccgtgccaatatc 141
||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatc 135
>55032_zma-miR171e:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatcctagt 146
||||||||||||||||||||| ||||
Sbjct: 87 tgattgagccgtgccaatatcttagt 112
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 gatgttggctcggttcactcagac 44
||||||||||||| ||||||||||
Sbjct: 21 gatgttggctcggctcactcagac 44
>55024_zma-miR170m:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 ttgattgagccgtgccaatatc 141
||||||||||||||||||||||
Sbjct: 94 ttgattgagccgtgccaatatc 115
>55037_zma-miR171j:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatc 110
>55031_zma-miR171d:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatatc 102
>54836_vvi-miR171i:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatc 89
>54828_vvi-miR171a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>54680_tae-miR170b:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatatc 94
>54460_sbi-miR171i:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>54455_sbi-miR171d:pmrd
Length = 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatc 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 gatgttggctcggttcactcagac 44
||||||||||||| ||||||||||
Sbjct: 21 gatgttggctcggctcactcagac 44
>54453_sbi-miR171b:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatc 113
>52725_ptc-miRf10903-akr:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 60 tgattgagccgtgccaatatc 80
>51691_ptc-miR171h:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatc 91
>51690_ptc-miR171g:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatc 91
>51688_ptc-miR171e:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 65 tgattgagccgtgccaatatc 85
>49676_osa-miRf10461-akr:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 95 tgattgagccgtgccaatatc 115
>48905_osa-miR171n:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatatc 99
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 gatgttggctcggttcactcagac 44
||||||||||||| ||||||||||
Sbjct: 1 gatgttggctcggctcactcagac 24
>48904_osa-miR171m:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>48900_osa-miR171f:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatc 117
>48898_osa-miR171d:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125
>48894_osa-miR170b:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>48893_osa-miR170a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatatc 99
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 gatgttggctcggttcactcagac 44
||||||||||||| ||||||||||
Sbjct: 1 gatgttggctcggctcactcagac 24
>48663_hvv-miR171:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatatc 78
>48662_hvv-miR170:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatatc 78
>46877_aqc-miR171b:pmrd
Length = 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 tgattgagccgtgccaatatc 141
|||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatc 75
