miRNEST 2.0, an integrative microRNA resource :: BLAST
>51723_ptc-miR393d:pmrd
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 113 tcattggatcatgcaatcccttcggaattttcca 146
|||||||||||||| ||||||| |||||||||||
Sbjct: 74 tcattggatcatgcgatcccttaggaattttcca 107
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatctaat 45
|||||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatctaat 35
>48501_ghr-miR393:pmrd
Length = 119
Score = 52.0 bits (26), Expect = 1e-07
Identities = 43/48 (89%), Gaps = 3/48 (6%)
Strand = Plus / Plus
Query: 94 ttttgttgattcagttcact---cattggatcatgcaatcccttcgga 138
|||||||||||||||||| | ||||||||||||| |||||||||||
Sbjct: 72 ttttgttgattcagttcagtacccattggatcatgcgatcccttcgga 119
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatctaat 45
|||||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatctaat 25
>55056_zma-miR393:pmrd
Length = 126
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 11 ggtggagagctccaaagggatcgcattgatcta 43
||||||| ||||||||||||||||||||||||
Sbjct: 11 ggtggaggactccaaagggatcgcattgatcta 43
>51722_ptc-miR393c:pmrd
Length = 107
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatctaat 45
|||||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatctaat 35
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 116 ttggatcatgcaatcccttcggaattttcca 146
||||||||||| ||||||| |||||||||||
Sbjct: 77 ttggatcatgcgatcccttaggaattttcca 107
>55061_zma-miR393e:pmrd
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 20 ctccaaagggatcgcattgatcta 43
||||||||||||||||||||||||
Sbjct: 88 ctccaaagggatcgcattgatcta 65
>55060_zma-miR393d:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 20 ctccaaagggatcgcattgatcta 43
||||||||||||||||||||||||
Sbjct: 90 ctccaaagggatcgcattgatcta 67
>55059_zma-miR393c:pmrd
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 ctccaaagggatcgcattgatcta 43
||||||||||||||||||||||||
Sbjct: 2 ctccaaagggatcgcattgatcta 25
>55058_zma-miR393b:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 ctccaaagggatcgcattgatcta 43
||||||||||||||||||||||||
Sbjct: 2 ctccaaagggatcgcattgatcta 25
>55063_zma-miR393g:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatcta 43
|||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcta 23
>54849_vvi-miR393a:pmrd
Length = 126
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 ggtggagagctccaaagggatcgcattgatc 41
|||||| || |||||||||||||||||||||
Sbjct: 1 ggtggacagttccaaagggatcgcattgatc 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 114 cattggatcatgcaatcccttcggaattttccatcag 150
||||||||||||| ||||||| |||| | ||||||||
Sbjct: 90 cattggatcatgctatcccttaggaactctccatcag 126
>48919_osa-miR393b:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 ctccaaagggatcgcattgatct 42
|||||||||||||||||||||||
Sbjct: 26 ctccaaagggatcgcattgatct 48
>48918_osa-miR393b:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 ctccaaagggatcgcattgatct 42
|||||||||||||||||||||||
Sbjct: 26 ctccaaagggatcgcattgatct 48
>55062_zma-miR393f:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>55057_zma-miR393a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>54850_vvi-miR393b:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>54470_sbi-miR393:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>53841_ptc-miRf12019-akr:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 17 tccaaagggatcgcattgatc 37
>53840_ptc-miRf12018-akr:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatc 34
>52949_ptc-miRf11127-akr:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatc 34
>52948_ptc-miRf11126-akr:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatc 34
>52374_ptc-miRf10552-akr:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatc 34
>51972_ptc-miRf10150-akr:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 82 tccaaagggatcgcattgatc 62
>51950_ptc-miRf10128-akr:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 17 tccaaagggatcgcattgatc 37
>51721_ptc-miR393b:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>51720_ptc-miR393a:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>48917_osa-miR393:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>48731_mtr-miR393b:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
>48730_mtr-miR393:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>48576_gma-miR393:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>48373_bna-miR393:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>47287_ath-miRf10187-akr:pmrd
Length = 162
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 12 tccaaagggatcgcattgatc 32
>47214_ath-miRf10114-akr:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 10 tccaaagggatcgcattgatc 30
>46999_ath-miR393b:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>46998_ath-miR393a:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
