miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54851_vvi-miR394a:pmrd
          Length = 89

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 11 cagagccaatttggcattctgtccacctccatg 43
          |||||||| ||||||||||||||||||||||||
Sbjct: 1  cagagccattttggcattctgtccacctccatg 33




>54853_vvi-miR394c:pmrd
          Length = 102

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 11 cagagccaatttggcattctgtccacctccat 42
          |||||||| |||||||||||||||||||||||
Sbjct: 1  cagagccattttggcattctgtccacctccat 32




>48502_ghr-miR394:pmrd
          Length = 97

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 ttggcattctgtccacctccat 42
          ||||||||||||||||||||||
Sbjct: 1  ttggcattctgtccacctccat 22



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 85  tggaggcggccagtatgtcaa 105
           |||||||||||||||||||||
Sbjct: 77  tggaggcggccagtatgtcaa 97




>48920_osa-miR394:pmrd
          Length = 110

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 20 tttggcattctgtccacctcc 40
          |||||||||||||||||||||
Sbjct: 13 tttggcattctgtccacctcc 33




>47001_ath-miR394b:pmrd
          Length = 121

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 20 tttggcattctgtccacctcc 40
          |||||||||||||||||||||
Sbjct: 13 tttggcattctgtccacctcc 33




>47000_ath-miR394a:pmrd
          Length = 117

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 20 tttggcattctgtccacctcc 40
          |||||||||||||||||||||
Sbjct: 13 tttggcattctgtccacctcc 33




>55065_zma-miR394b:pmrd
          Length = 122

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ttggcattctgtccacctcc 40
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>55064_zma-miR394a:pmrd
          Length = 126

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ttggcattctgtccacctcc 40
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>54852_vvi-miR394b:pmrd
          Length = 93

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ttggcattctgtccacctcc 40
          ||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30




>54472_sbi-miR394b:pmrd
          Length = 111

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ttggcattctgtccacctcc 40
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>54471_sbi-miR394a:pmrd
          Length = 110

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ttggcattctgtccacctcc 40
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>51918_ptc-miRf10096-akr:pmrd
          Length = 121

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ttggcattctgtccacctcc 40
          ||||||||||||||||||||
Sbjct: 25 ttggcattctgtccacctcc 44