miRNEST 2.0, an integrative microRNA resource :: BLAST
>54881_vvi-miR399e:pmrd
Length = 112
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 84 tagtgtgtcttctgccaaaggagatttgcccggcaattcttc 125
||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 70 tagtgtgccctctgccaaaggagatttgcccggcaattcttc 111
>51749_ptc-miR399c:pmrd
Length = 126
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 96 tgccaaaggagatttgcccggcaattcttc 125
||||||||||||||||||||||||||||||
Sbjct: 97 tgccaaaggagatttgcccggcaattcttc 126
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 ggtgcagttgcattacagggcaa 28
|||||||||||||||||||||||
Sbjct: 1 ggtgcagttgcattacagggcaa 23
>51748_ptc-miR399b:pmrd
Length = 126
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 96 tgccaaaggagatttgcccggcaattcttc 125
||||||||||||||||||||||||||||||
Sbjct: 97 tgccaaaggagatttgcccggcaattcttc 126
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 ggtgcagttgcattacagggcaa 28
|||||||||||||||||||||||
Sbjct: 1 ggtgcagttgcattacagggcaa 23
>47020_ath-miR399f:pmrd
Length = 118
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 94 tctgccaaaggagatttgcccggcaattct 123
||||||||||||||||||||||| ||||||
Sbjct: 86 tctgccaaaggagatttgcccggtaattct 115
>52630_ptc-miRf10808-akr:pmrd
Length = 110
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 96 tgccaaaggagatttgcccggcaat 120
|||||||||||||||||||||||||
Sbjct: 25 tgccaaaggagatttgcccggcaat 1
>51890_ptc-miRf10068-akr:pmrd
Length = 110
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 96 tgccaaaggagatttgcccggcaat 120
|||||||||||||||||||||||||
Sbjct: 25 tgccaaaggagatttgcccggcaat 1
>51756_ptc-miR399j:pmrd
Length = 112
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 85 agtgtgtcttctgccaaaggagatttgcccggcaattcttc 125
|||||| | |||||||||||||||||| ||||||| |||||
Sbjct: 71 agtgtgccctctgccaaaggagatttgtccggcaaatcttc 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 14 tgcattacagggcaaagatctccattggcaggctgccact 53
||||||||||||||| || |||||||||||||| ||||||
Sbjct: 1 tgcattacagggcaa-gacctccattggcaggcagccact 39
>47535_ath-miRf10435-akr:pmrd
Length = 92
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 94 tctgccaaaggagatttgcccggcaattc 122
||||||||||||||||||||| |||||||
Sbjct: 64 tctgccaaaggagatttgccccgcaattc 92
>47018_ath-miR399d:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 94 tctgccaaaggagatttgcccggcaattc 122
||||||||||||||||||||| |||||||
Sbjct: 68 tctgccaaaggagatttgccccgcaattc 96
>51747_ptc-miR399a:pmrd
Length = 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 95 ctgccaaaggagatttgcccggcaattc 122
|||||||||||||||||||| |||||||
Sbjct: 90 ctgccaaaggagatttgccccgcaattc 117
>48754_mtr-miR399e:pmrd
Length = 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 84 tagtgtgtcttctgccaaaggagatttgcccggcaattct 123
|||||||| ||||||||||||||||||||| || |||||
Sbjct: 83 tagtgtgtaatctgccaaaggagatttgcccagcgattct 122
>47015_ath-miR399a:pmrd
Length = 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 94 tctgccaaaggagatttgcccggcaattcttc 125
||||||||||||||||||||| | ||||||||
Sbjct: 91 tctgccaaaggagatttgccctgtaattcttc 122
>54494_sbi-miR399f:pmrd
Length = 120
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 94 tctgccaaaggagatttgcccggcaat 120
||||||||||||||||||||| |||||
Sbjct: 79 tctgccaaaggagatttgcccagcaat 105
>48969_osa-miR399f:pmrd
Length = 117
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 94 tctgccaaaggagatttgcccggcaat 120
||||||||||||||||||||| |||||
Sbjct: 85 tctgccaaaggagatttgcccagcaat 111
>48377_bna-miR399:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 tctgccaaaggagatttgcccgg 116
|||||||||||||||||||||||
Sbjct: 79 tctgccaaaggagatttgcccgg 101
>54493_sbi-miR399e:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 95 ctgccaaaggagatttgcccggcaat 120
|||||||||||||||||||| |||||
Sbjct: 86 ctgccaaaggagatttgcccagcaat 111
>49373_osa-miRf10158-akr:pmrd
Length = 112
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 95 ctgccaaaggagatttgcccggcaat 120
|||||||||||||||||||| |||||
Sbjct: 84 ctgccaaaggagatttgcccagcaat 109
>48968_osa-miR399e:pmrd
Length = 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 95 ctgccaaaggagatttgcccggcaat 120
|||||||||||||||||||| |||||
Sbjct: 87 ctgccaaaggagatttgcccagcaat 112
>48750_mtr-miR399a:pmrd
Length = 134
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 94 tctgccaaaggagatttgcccggcaattct 123
||||||||||||||||||||| || |||||
Sbjct: 93 tctgccaaaggagatttgcccagcgattct 122
>48970_osa-miR399g:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 94 tctgccaaaggagatttgccc 114
|||||||||||||||||||||
Sbjct: 87 tctgccaaaggagatttgccc 107
>54883_vvi-miR399g:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 ctgccaaaggagatttgccc 114
||||||||||||||||||||
Sbjct: 82 ctgccaaaggagatttgccc 101
>47019_ath-miR399e:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tctgccaaaggagatttgcc 113
||||||||||||||||||||
Sbjct: 77 tctgccaaaggagatttgcc 96
