miRNEST 2.0, an integrative microRNA resource :: BLAST
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 83.8 bits (42), Expect = 5e-17
Identities = 77/86 (89%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 8 ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67
|||||||||||||||||||||||| ||||||||| || ||||| ||| ||||||| |||
Sbjct: 2 ggagtggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagc 60
Query: 68 tatggatcccacagtcctatgtatca 93
||||||| |||||||||||| |||||
Sbjct: 61 tatggat-ccacagtcctatctatca 85
>51604_ptc-miR159c:pmrd
Length = 183
Score = 83.8 bits (42), Expect = 5e-17
Identities = 77/86 (89%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 8 ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67
|||||||||||||||||||||||| ||||||||| || ||||| ||| ||||||| |||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagc 65
Query: 68 tatggatcccacagtcctatgtatca 93
||||||| |||||||||||| |||||
Sbjct: 66 tatggat-ccacagtcctatctatca 90
>51602_ptc-miR159a:pmrd
Length = 183
Score = 83.8 bits (42), Expect = 5e-17
Identities = 77/86 (89%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 8 ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67
|||||||||||||||||||||||| ||||||||| || ||||| ||| ||||||| |||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagc 65
Query: 68 tatggatcccacagtcctatgtatca 93
||||||| |||||||||||| |||||
Sbjct: 66 tatggat-ccacagtcctatctatca 90
>54777_vvi-miR159c:pmrd
Length = 190
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 8 ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67
|||||||||||||||||||||||| ||||| ||| | ||||| |||||||||||||
Sbjct: 5 ggagtggagctccttgaagtccaatagagggtcttac-tgggtagattgagctgctgact 63
Query: 68 tatggatcccacagtcctat 87
|||||||||||||| |||||
Sbjct: 64 tatggatcccacagccctat 83
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 125 gataggcttgtggcttgcatat 146
||||||||||||||||||||||
Sbjct: 104 gataggcttgtggcttgcatat 125
>48539_gma-miR159a:pmrd
Length = 214
Score = 65.9 bits (33), Expect = 1e-11
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 10 agtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagcta 69
|||||||||||||||||||||| |||| ||| | |||| |||||||||||| |||||
Sbjct: 19 agtggagctccttgaagtccaattgaggatcttact-gggtgaattgagctgcttagcta 77
Query: 70 tggatcccacagt 82
|||||||||||||
Sbjct: 78 tggatcccacagt 90
>51603_ptc-miR159b:pmrd
Length = 187
Score = 63.9 bits (32), Expect = 5e-11
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 8 ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67
|||||||||||||||||||||||| ||| | || || ||||| || ||||||||||||
Sbjct: 7 ggagtggagctccttgaagtccaatagaagctcctgct-gggtagatcgagctgctgagc 65
Query: 68 tatggatcccacagtcctat 87
|||| ||||||||| |||||
Sbjct: 66 tatgaatcccacagccctat 85
>54378_pvu-miR159:pmrd
Length = 174
Score = 56.0 bits (28), Expect = 1e-08
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctat 70
||||||||||||||||||||| |||| ||| | |||| ||||||||||| ||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagctat 59
Query: 71 ggatcccacagt 82
||||||||||||
Sbjct: 60 ggatcccacagt 71
>54377_pvu-miR159:pmrd
Length = 174
Score = 56.0 bits (28), Expect = 1e-08
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctat 70
||||||||||||||||||||| |||| ||| | |||| ||||||||||| ||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagctat 59
Query: 71 ggatcccacagt 82
||||||||||||
Sbjct: 60 ggatcccacagt 71
>54540_sly-miR159:pmrd
Length = 177
Score = 48.1 bits (24), Expect = 3e-06
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 12 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 71
|||||||||||||||||||| | | |||| || || |||||||||||||||| |||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaaca-ggttaaattgagctgctgacctatg 59
Query: 72 gatcccacagtcctat 87
||| || ||| |||||
Sbjct: 60 gattcctcagccctat 75
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 125 gataggcttgtggcttgcat 144
||||||||||||||||||||
Sbjct: 150 gataggcttgtggcttgcat 169
